RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 ATF1P18846 271 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 PMELP40967 661 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 GNG3P63215 75 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 GPR50Q13585 617 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 Q499Y3 187 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 SHEQ5VZ18 495 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 KRTAP1-3Q8IUG1 177 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 SERPINA12Q8IW75 414 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 PHC2Q8IXK0 858 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 WFDC11Q8NEX6 87 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 OR1M1Q8NGA1 313 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 OR5A2Q8NGI9 324 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 PP6455Q8WZ26 134 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 FCGR1BQ92637 280 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 C10orf35Q96D05 121 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 ZCCHC4Q9H5U6 513 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 FN3KRPQ9HA64 309 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 DLL4Q9NR61 685 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 C1orf123Q9NWV4 160 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 TAS2R4Q9NYW5 299 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 UNC79Q9P2D8 2635 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 CENPEQ02224 2701 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 IGHV4-30-2A0A087WSY4 118 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 IGKV1-9A0A0C4DH69 117 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 OR5B21A6NL26 309 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 ZNF879B4DU55 563 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 RP2O75695 350 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 ZNF205O95201 554 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 PLATP00750 562 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 CD1AP06126 327 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 GMFBP60983 142 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 HOXA4Q00056 320 aaPredicted RBP11.73□□□□□ -0.53
TPM3-211ENST00000368531 ZNF154Q13106 437 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 CNN3Q15417 329 aaKnown RBP11.73□□□□□ -0.53
TPM3-211ENST00000368531 SSX1Q16384 188 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 ACSM3Q53FZ2 586 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 AVPI1Q5T686 147 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 KRT74Q7RTS7 529 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 MS4A15Q8N5U1 240 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 PARP16Q8N5Y8 322 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 CELF2-AS1Q8N7Q2 184 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 SCCPDHQ8NBX0 429 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 OR5D14Q8NGL3 314 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 OR11L1Q8NGX0 322 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 C10orf105Q8TEF2 133 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 SPACA5Q96QH8 159 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 METTL17Q9H7H0 456 aaPredicted RBP11.73□□□□□ -0.53
TPM3-211ENST00000368531 CHODLQ9H9P2 273 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 VCX3AQ9NNX9 186 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 MYOZ1Q9NP98 299 aaPredicted RBP11.73□□□□□ -0.53
TPM3-211ENST00000368531 TMEM106BQ9NUM4 274 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 PDZD2O15018 2839 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 POLQO75417 2590 aa11.73□□□□□ -0.53
TPM3-211ENST00000368531 PQLC2LA1A4F0 135 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 TRIM64BA6NI03 449 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 TMEM210A6NLX4 147 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 CLDN25C9JDP6 229 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 C3orf80F5H4A9 247 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 CDIPTO14735 213 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 HCKP08631 526 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 CSF3P09919 207 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 IRF2P14316 349 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 AZGP1P25311 298 aaKnown RBP11.72□□□□□ -0.53
TPM3-211ENST00000368531 TGFBR2P37173 567 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 GATA4P43694 442 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 DSCR9P59020 149 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 MRPS11P82912 194 aaKnown RBP11.72□□□□□ -0.53
TPM3-211ENST00000368531 FAM201AQ5SY85 155 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 FAM27D1Q5T7N8 215 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 HAGHLQ6PII5 290 aaPredicted RBP11.72□□□□□ -0.53
TPM3-211ENST00000368531 PRSS57Q6UWY2 283 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 UTS2BQ765I0 119 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 CEACAM19Q7Z692 300 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 ANGPTL5Q86XS5 388 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 C11orf53Q8IXP5 236 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 C19orf18Q8NEA5 215 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 OR51A2Q8NGJ7 313 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 RFT1Q96AA3 541 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 BORCS8Q96FH0 119 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 DERL3Q96Q80 235 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 PIMREGQ9BSJ6 248 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 OR51I2Q9H344 312 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 NARFLQ9H6Q4 476 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 NOX4Q9NPH5 578 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 SF3B6Q9Y3B4 125 aaKnown RBP11.72□□□□□ -0.53
TPM3-211ENST00000368531 BOLA1Q9Y3E2 137 aa11.72□□□□□ -0.53
TPM3-211ENST00000368531 TRAV8-7A0A075B6U6 113 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 TRBV5-7A0A0A0MS05 114 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 LRP5LA4QPB2 252 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 LRRC30A6NM36 301 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 TMEM178BH3BS89 294 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 CCRL2O00421 344 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 PIN1P1O15428 100 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 SULT1B1O43704 296 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 RHBDL1O75783 438 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 SMIM18P0DKX4 95 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 RAB3AP20336 220 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 PRKACBP22694 351 aa11.71□□□□□ -0.53
TPM3-211ENST00000368531 GPR6P46095 362 aaPredicted RBP11.71□□□□□ -0.53
TPM3-211ENST00000368531 HAAOP46952 286 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms