RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 TBC1D26Q86UD7 250 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 MUC20Q8N307 709 aaPredicted RBP4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 KIR3DL3Q8N743 410 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 BHLHE23Q8NDY6 225 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 C19orf18Q8NEA5 215 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 OR10S1Q8NGN2 331 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 FNDC8Q8TC99 324 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 C10orf82Q8WW14 230 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 PTP4A1Q93096 173 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 UPRTQ96BW1 309 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 RASD2Q96D21 266 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 HAVCR1Q96D42 359 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 ATP6V1G3Q96LB4 118 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 PRRC1Q96M27 445 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 ZNF583Q96ND8 569 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 ZNF570Q96NI8 536 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 SH3GL1Q99961 368 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 TMEM246Q9BRR3 403 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 FNDC11Q9BVV2 318 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 POLR2J2Q9GZM3 115 aaKnown RBP4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 SLITRK2Q9H156 845 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 POLR2J3Q9H1A7 115 aaKnown RBP4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 WDR76Q9H967 626 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 MARCH7Q9H992 704 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 TMEM165Q9HC07 324 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 INTS9Q9NV88 658 aaKnown RBP4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 IL20RAQ9UHF4 553 aa4.28□□□□□ -1.72
RNU4-4P-201ENST00000364588 A0A087WUU8 490 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 TEX13CA0A0J9YWL9 993 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 LOC100653049A0A140TA62 436 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 PRSS37A4D1T9 235 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 OR6C6A6NF89 314 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 FAM220BPB1ANY3 271 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 CLDN34H7C241 214 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 XKRYO14609 159 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 CDC42EP2O14613 210 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 FFAR1O14842 300 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 RER1O15258 196 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 MLNRO43193 412 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 SLC16A7O60669 478 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 KRT34O76011 436 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 KRT36O76013 467 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 HLA-DPB1P04440 258 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 CRYBA1P05813 215 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 CD14P08571 375 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 ZNF26P17031 533 aaPredicted RBP4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 TUBG1P23258 451 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 IFNA8P32881 189 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 PMELP40967 661 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 PITPNBP48739 271 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 SRP9P49458 86 aaKnown RBP4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 RAG2P55895 527 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 FGF12P61328 243 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 SELENOWP63302 87 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 PRKCDQ05655 676 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 AQP6Q13520 282 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 KRR1Q13601 381 aaKnown RBP4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 TRAM2Q15035 370 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 MEP1BQ16820 701 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 ZNF404Q494X3 552 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 ZBED5Q49AG3 693 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 CCDC92Q53HC0 331 aaPredicted RBP4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 ERICH5Q6P6B1 374 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 FIP1L1Q6UN15 594 aaKnown RBP4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 LYPD2Q6UXB3 125 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 LRRN1Q6UXK5 716 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 C17orf107Q6ZR85 190 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 C9orf139Q6ZV77 190 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 FAM122BQ7Z309 247 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 OFCC1Q8IZS5 231 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 GJC3Q8NFK1 279 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 OR2T12Q8NG77 320 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 OR8G5Q8NG78 346 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 OR8J3Q8NGG0 315 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 OR8B3Q8NGG8 313 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 OR13G1Q8NGZ3 307 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 OR1F12Q8NHA8 337 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 LZICQ8WZA0 190 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 PLEKHA8Q96JA3 519 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 MAGEB18Q96M61 343 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 ZNF582Q96NG8 517 aaPredicted RBP4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 OR8B2Q96RD0 313 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 CCT8L2Q96SF2 557 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 NUDT16L1Q9BRJ7 211 aaKnown RBP4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 PCGF1Q9BSM1 259 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 SYT4Q9H2B2 425 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 TUBG2Q9NRH3 451 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 PDP1Q9P0J1 537 aaPredicted RBP4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 MIOXQ9UGB7 285 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 POLR1DQ9Y2S0 133 aa4.27□□□□□ -1.73
RNU4-4P-201ENST00000364588 KIR2DS1A0A191URI9 304 aa4.26□□□□□ -1.73
RNU4-4P-201ENST00000364588 ELOVL7A1L3X0 281 aa4.26□□□□□ -1.73
RNU4-4P-201ENST00000364588 HTR3EA5X5Y0 456 aa4.26□□□□□ -1.73
RNU4-4P-201ENST00000364588 LRRC30A6NM36 301 aa4.26□□□□□ -1.73
RNU4-4P-201ENST00000364588 SRRM5B3KS81 715 aa4.26□□□□□ -1.73
RNU4-4P-201ENST00000364588 IFNL4K9M1U5 179 aa4.26□□□□□ -1.73
RNU4-4P-201ENST00000364588 BUB3O43684 328 aa4.26□□□□□ -1.73
RNU4-4P-201ENST00000364588 EDF1O60869 148 aaKnown RBP4.26□□□□□ -1.73
RNU4-4P-201ENST00000364588 KHDRBS3O75525 346 aaKnown RBP4.26□□□□□ -1.73
RNU4-4P-201ENST00000364588 ZNF682O95780 498 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms