RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 GK2Q14410 553 aaPredicted RBP7.91□□□□□ -1.14
UPF2-202ENST00000357604 PCK2Q16822 640 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 ACTBL2Q562R1 376 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 UBE2UQ5VVX9 321 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 RAB40AQ8WXH6 277 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 HTRA1Q92743 480 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 PELI1Q96FA3 418 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 DIRAS2Q96HU8 199 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 MEGF10Q96KG7 1140 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 SELENOIQ9C0D9 397 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 RHBDD3Q9Y3P4 386 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 CTXN2P0C2S0 81 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 CALCBP10092 127 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 GUCA2AQ02747 115 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 TMEM69Q5SWH9 247 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 SLC25A26Q70HW3 274 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 MRPS24Q96EL2 167 aaKnown RBP7.91□□□□□ -1.14
UPF2-202ENST00000357604 COX4I2Q96KJ9 171 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 OR14A2Q96R54 314 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 MRPL37Q9BZE1 423 aaKnown RBP7.91□□□□□ -1.14
UPF2-202ENST00000357604 OR6C3Q9NZP0 311 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 F5H5P2 479 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 ADAM10O14672 748 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 OR7C1O76099 320 aaPredicted RBP7.91□□□□□ -1.14
UPF2-202ENST00000357604 MUC1P15941 1255 aaPredicted RBP7.91□□□□□ -1.14
UPF2-202ENST00000357604 EPHA1P21709 976 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 RPS27P42677 84 aaKnown RBP7.91□□□□□ -1.14
UPF2-202ENST00000357604 PTH2RP49190 550 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 HNRNPA0Q13151 305 aaKnown RBP7.91□□□□□ -1.14
UPF2-202ENST00000357604 DYNC1I2Q13409 638 aaKnown RBP7.91□□□□□ -1.14
UPF2-202ENST00000357604 HES5Q5TA89 166 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 ZNF561Q8N587 486 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 FCAMRQ8WWV6 532 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 MAP6Q96JE9 813 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 TRAF4Q9BUZ4 470 aaPredicted RBP7.91□□□□□ -1.14
UPF2-202ENST00000357604 ST6GALNAC2Q9UJ37 374 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 CROCCQ5TZA2 2017 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 NOTOA8MTQ0 251 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 ISG15P05161 165 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 CD200P41217 278 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 CCL8P80075 99 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 SGK3Q96BR1 496 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 CMSS1Q9BQ75 279 aaKnown RBP7.9□□□□□ -1.14
UPF2-202ENST00000357604 OOEPA6NGQ2 149 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 LIPFP07098 398 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 ERVFRD-1P60508 538 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 ZNF92Q03936 586 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 EDDM3AQ14507 147 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 SMN1Q16637 294 aaKnown RBP7.9□□□□□ -1.14
UPF2-202ENST00000357604 TMEM30BQ3MIR4 351 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 SPARTQ8N0X7 666 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 NABP1Q96AH0 204 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 OCSTAMPQ9BR26 566 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 DCSTAMPQ9H295 470 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 WIPI2Q9Y4P8 454 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 KIR2DS1A0A191URI9 304 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 F12P00748 615 aaPredicted RBP7.9□□□□□ -1.14
UPF2-202ENST00000357604 KIR2DS4P43632 304 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 KIR2DS1Q14954 304 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 PLGLAQ15195 96 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 SLC30A2Q9BRI3 323 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 AIFM2Q9BRQ8 373 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 SHARPINQ9H0F6 387 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 MSL2Q9HCI7 577 aa7.9□□□□□ -1.14
UPF2-202ENST00000357604 A0A0G2JMP0 313 aa7.9□□□□□ -1.15
UPF2-202ENST00000357604 A0A0X1KG70 313 aa7.9□□□□□ -1.15
UPF2-202ENST00000357604 DPRXA6NFQ7 191 aa7.9□□□□□ -1.15
UPF2-202ENST00000357604 CD40LGP29965 261 aa7.9□□□□□ -1.15
UPF2-202ENST00000357604 TAS2R46P59540 309 aa7.9□□□□□ -1.15
UPF2-202ENST00000357604 RPS25P62851 125 aaKnown RBP7.9□□□□□ -1.15
UPF2-202ENST00000357604 HIST1H3AP68431 136 aa7.9□□□□□ -1.15
UPF2-202ENST00000357604 GRK1Q15835 563 aa7.9□□□□□ -1.15
UPF2-202ENST00000357604 HIST2H3PS2Q5TEC6 136 aa7.9□□□□□ -1.15
UPF2-202ENST00000357604 PYHIN1Q6K0P9 492 aa7.9□□□□□ -1.15
UPF2-202ENST00000357604 HIST2H3AQ71DI3 136 aa7.9□□□□□ -1.15
UPF2-202ENST00000357604 ANGPTL5Q86XS5 388 aa7.9□□□□□ -1.15
UPF2-202ENST00000357604 OR4M2Q8NGB6 313 aa7.9□□□□□ -1.15
UPF2-202ENST00000357604 OR5T2Q8NGG2 359 aa7.9□□□□□ -1.15
UPF2-202ENST00000357604 NDNFQ8TB73 568 aa7.9□□□□□ -1.15
UPF2-202ENST00000357604 RPL3LQ92901 407 aaKnown RBP7.9□□□□□ -1.15
UPF2-202ENST00000357604 C12orf43Q96C57 262 aaKnown RBP7.9□□□□□ -1.15
UPF2-202ENST00000357604 AKR1E2Q96JD6 320 aa7.9□□□□□ -1.15
UPF2-202ENST00000357604 BEX2Q9BXY8 128 aa7.9□□□□□ -1.15
UPF2-202ENST00000357604 MS4A7Q9GZW8 240 aaPredicted RBP7.9□□□□□ -1.15
UPF2-202ENST00000357604 NDUFB11Q9NX14 153 aa7.9□□□□□ -1.15
UPF2-202ENST00000357604 SLC25A10Q9UBX3 287 aaPredicted RBP7.9□□□□□ -1.15
UPF2-202ENST00000357604 E9PI62 339 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 AIPO00170 330 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 KNG1P01042 644 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 IL1AP01583 271 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 CELA3BP08861 270 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 CD80P33681 288 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 ACTBP60709 375 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 ACTG1P63261 375 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 FAM166AQ6J272 317 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 NKX3-1Q99801 234 aaPredicted RBP7.89□□□□□ -1.15
UPF2-202ENST00000357604 METTL17Q9H7H0 456 aaPredicted RBP7.89□□□□□ -1.15
UPF2-202ENST00000357604 ENY2Q9NPA8 101 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 FAM206AQ9NX38 181 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 COMMD3Q9UBI1 195 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms