RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 PBDC1Q9BVG4 233 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 OR2H1Q9GZK4 316 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 MSL2Q9HCI7 577 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 TMEM38BQ9NVV0 291 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 A6NHS1 94 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 OR5B21A6NL26 309 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 F2RL2O00254 374 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 EPHA2P29317 976 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 CCL8P80075 99 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 ERHP84090 104 aaKnown RBP8.59□□□□□ -1.03
GABPA-201ENST00000354828 DBPQ10586 325 aaPredicted RBP8.59□□□□□ -1.03
GABPA-201ENST00000354828 DEGS2Q6QHC5 323 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 LSMEM1Q8N8F7 131 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 MS4A7Q9GZW8 240 aaPredicted RBP8.59□□□□□ -1.03
GABPA-201ENST00000354828 DLL4Q9NR61 685 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 ZNF318Q5VUA4 2279 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 MGAMO43451 1857 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 DEFB108AA8MXU0 73 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 C9orf172C9J069 976 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 AQP8O94778 261 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 LSM6P62312 80 aaKnown RBP8.59□□□□□ -1.03
GABPA-201ENST00000354828 VMA21Q3ZAQ7 101 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 PRSS45Q7RTY3 260 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 NUDCD2Q8WVJ2 157 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 CHST6Q9GZX3 395 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 ASF1BQ9NVP2 202 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 TAS2R5Q9NYW4 299 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 TMA7Q9Y2S6 64 aaKnown RBP8.59□□□□□ -1.03
GABPA-201ENST00000354828 CACNA1IQ9P0X4 2223 aa8.59□□□□□ -1.03
GABPA-201ENST00000354828 TSPAN2O60636 221 aa8.59□□□□□ -1.04
GABPA-201ENST00000354828 SMPD2O60906 423 aa8.59□□□□□ -1.04
GABPA-201ENST00000354828 UPK1BO75841 260 aa8.59□□□□□ -1.04
GABPA-201ENST00000354828 PTTG1O95997 202 aa8.59□□□□□ -1.04
GABPA-201ENST00000354828 IGKV1D-16P01601 117 aa8.59□□□□□ -1.04
GABPA-201ENST00000354828 PSMB1P20618 241 aaKnown RBP8.59□□□□□ -1.04
GABPA-201ENST00000354828 FCGR2CP31995 323 aa8.59□□□□□ -1.04
GABPA-201ENST00000354828 BRS3P32247 399 aa8.59□□□□□ -1.04
GABPA-201ENST00000354828 GABRA4P48169 554 aa8.59□□□□□ -1.04
GABPA-201ENST00000354828 PCBP3P57721 371 aaKnown RBP8.59□□□□□ -1.04
GABPA-201ENST00000354828 LINC01560Q8TB33 94 aa8.59□□□□□ -1.04
GABPA-201ENST00000354828 DPF1Q92782 380 aa8.59□□□□□ -1.04
GABPA-201ENST00000354828 SERTAD4Q9NUC0 356 aa8.59□□□□□ -1.04
GABPA-201ENST00000354828 RNF115Q9Y4L5 304 aa8.59□□□□□ -1.04
GABPA-201ENST00000354828 AMMECR1Q9Y4X0 333 aaPredicted RBP8.59□□□□□ -1.04
GABPA-201ENST00000354828 COL6A6A6NMZ7 2263 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 CDC42EP2O14613 210 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 ADRA2AP08913 450 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 RAB4BP61018 213 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 WDR38Q5JTN6 314 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 PARP16Q8N5Y8 322 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 MED30Q96HR3 178 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 SFXN3Q9BWM7 321 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 INTS1Q8N201 2190 aaKnown RBP8.58□□□□□ -1.04
GABPA-201ENST00000354828 M0R1X1 148 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 SMAD7O15105 426 aaKnown RBP8.58□□□□□ -1.04
GABPA-201ENST00000354828 ST8SIA5O15466 376 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 UPK3AO75631 287 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 TSPAN15O95858 294 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 ETV6P41212 452 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 RHEBQ15382 184 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 KISS1Q15726 138 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 ZNF239Q16600 458 aaKnown RBP8.58□□□□□ -1.04
GABPA-201ENST00000354828 OR8G2PQ6IF36 304 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 HES4Q9HCC6 221 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 PRDM4Q9UKN5 801 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 C19orf67A6NJJ6 358 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 FAM157AC9JC47 383 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 IAH1Q2TAA2 248 aaPredicted RBP8.58□□□□□ -1.04
GABPA-201ENST00000354828 TMEM217Q8N7C4 229 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 DAZAP1Q96EP5 407 aaKnown RBP8.58□□□□□ -1.04
GABPA-201ENST00000354828 SEC22AQ96IW7 307 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 TSNAXQ99598 290 aaKnown RBP8.58□□□□□ -1.04
GABPA-201ENST00000354828 PCGF1Q9BSM1 259 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 DPCDQ9BVM2 203 aaPredicted RBP8.58□□□□□ -1.04
GABPA-201ENST00000354828 MFFQ9GZY8 342 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 RTTNQ86VV8 2226 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 ZNF705EA8MWA4 302 aaPredicted RBP8.58□□□□□ -1.04
GABPA-201ENST00000354828 K7EPK0 472 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 ZNF701M0R085 212 aaPredicted RBP8.58□□□□□ -1.04
GABPA-201ENST00000354828 CDIPTO14735 213 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 NGFRP08138 427 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 S100PP25815 95 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 NHLRC1Q6VVB1 395 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 TIPARPQ7Z3E1 657 aaKnown RBP8.58□□□□□ -1.04
GABPA-201ENST00000354828 FAM71E2Q8N5Q1 922 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 TMEM230Q96A57 120 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 CDCA4Q9BXL8 241 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 HEXA-AS1Q9H8Q6 139 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 FLVCR1Q9Y5Y0 555 aa8.58□□□□□ -1.04
GABPA-201ENST00000354828 TGM6O95932 706 aa8.57□□□□□ -1.04
GABPA-201ENST00000354828 OR5H8P0DN80 308 aa8.57□□□□□ -1.04
GABPA-201ENST00000354828 SLC35A2P78381 396 aa8.57□□□□□ -1.04
GABPA-201ENST00000354828 CMPK2Q5EBM0 449 aa8.57□□□□□ -1.04
GABPA-201ENST00000354828 SYT6Q5T7P8 510 aaPredicted RBP8.57□□□□□ -1.04
GABPA-201ENST00000354828 RBMXL1Q96E39 390 aaKnown RBP8.57□□□□□ -1.04
GABPA-201ENST00000354828 SIGLEC12Q96PQ1 595 aa8.57□□□□□ -1.04
GABPA-201ENST00000354828 SLC7A10Q9NS82 523 aa8.57□□□□□ -1.04
GABPA-201ENST00000354828 PLCXD1Q9NUJ7 323 aa8.57□□□□□ -1.04
GABPA-201ENST00000354828 LIN7CQ9NUP9 197 aaKnown RBP8.57□□□□□ -1.04
GABPA-201ENST00000354828 PCM1Q15154 2024 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms