RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 SERPINA2P20848 420 aa19.47■□□□□ 0.71
NKX2-1-201ENST00000354822 ATP1B3P54709 279 aa19.47■□□□□ 0.71
NKX2-1-201ENST00000354822 RPS18P62269 152 aaKnown RBP19.47■□□□□ 0.71
NKX2-1-201ENST00000354822 NSUN5P2Q63ZY6 315 aa19.47■□□□□ 0.71
NKX2-1-201ENST00000354822 AAED1Q7RTV5 226 aa19.47■□□□□ 0.71
NKX2-1-201ENST00000354822 PEG10Q86TG7 708 aaKnown RBP19.47■□□□□ 0.71
NKX2-1-201ENST00000354822 INO80EQ8NBZ0 244 aaPredicted RBP19.47■□□□□ 0.71
NKX2-1-201ENST00000354822 OR1F12Q8NHA8 337 aa19.47■□□□□ 0.71
NKX2-1-201ENST00000354822 OR2V1Q8NHB1 315 aa19.47■□□□□ 0.71
NKX2-1-201ENST00000354822 CXorf58Q96LI9 332 aa19.47■□□□□ 0.71
NKX2-1-201ENST00000354822 ST6GALNAC5Q9BVH7 336 aa19.47■□□□□ 0.71
NKX2-1-201ENST00000354822 NMES1Q9C002 83 aa19.47■□□□□ 0.71
NKX2-1-201ENST00000354822 STRADBQ9C0K7 418 aa19.47■□□□□ 0.71
NKX2-1-201ENST00000354822 C5orf66Q9H5L9 145 aa19.47■□□□□ 0.71
NKX2-1-201ENST00000354822 CCDC187A0A096LP49 1063 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 A0A0G2JMM0 328 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 A0A1W2PPB8 328 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 A0A1W2PRS3 328 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 ZSCAN5BA6NJL1 495 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 KIR3DP1A8MWS1 328 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 B8ZZF3 427 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 ZP3P21754 424 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 CYB561P49447 251 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 LRRC37A5PQ49AS3 106 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 GALNTL5Q7Z4T8 443 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 LHFPL1Q86WI0 220 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 ESX1Q8N693 406 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 CT55Q8WUE5 264 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 VRK1Q99986 396 aaPredicted RBP19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 ZNF391Q9UJN7 358 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 KIAA1549Q9HCM3 1950 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 SNU13P55769 128 aaKnown RBP19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 SNAI3Q3KNW1 292 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 RIPPLY2Q5TAB7 128 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 SULF2Q8IWU5 870 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 CSNK2A3Q8NEV1 391 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 ZNF775Q96BV0 537 aaPredicted RBP19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 PHYHIPLQ96FC7 376 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 ADGRG7Q96K78 797 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 CDC6Q99741 560 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 KCNMB2Q9Y691 235 aa19.46■□□□□ 0.71
NKX2-1-201ENST00000354822 C5orf51A6NDU8 294 aa19.45■□□□□ 0.7
NKX2-1-201ENST00000354822 LRRC3CA6NJW4 275 aa19.45■□□□□ 0.7
NKX2-1-201ENST00000354822 KRBOX1C9JBD0 128 aa19.45■□□□□ 0.7
NKX2-1-201ENST00000354822 SFT2D2O95562 160 aa19.45■□□□□ 0.7
NKX2-1-201ENST00000354822 RLN2P04090 185 aa19.45■□□□□ 0.7
NKX2-1-201ENST00000354822 PSMB6P28072 239 aa19.45■□□□□ 0.7
NKX2-1-201ENST00000354822 DLSTP36957 453 aa19.45■□□□□ 0.7
NKX2-1-201ENST00000354822 NPY4RP50391 375 aa19.45■□□□□ 0.7
NKX2-1-201ENST00000354822 TAAR9Q96RI9 348 aa19.45■□□□□ 0.7
NKX2-1-201ENST00000354822 ELL3Q9HB65 397 aaPredicted RBP19.45■□□□□ 0.7
NKX2-1-201ENST00000354822 CXCL13O43927 109 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 TRAPPC6AO75865 159 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 PRKACBP22694 351 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 PCBD1P61457 104 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 CNN3Q15417 329 aaKnown RBP19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 SURF2Q15527 256 aaPredicted RBP19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 ABLIM2Q6H8Q1 611 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 HSD17B13Q7Z5P4 300 aaPredicted RBP19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 EIF4E3Q8N5X7 224 aaKnown RBP19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 OR5AP2Q8NGF4 316 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 OR10D3Q8NH80 312 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 OR1S1Q8NH92 325 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 PIGTQ969N2 578 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 REEP6Q96HR9 211 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 RAB18Q9NP72 206 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 TIMM10BQ9Y5J6 103 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 ZDBF2Q9HCK1 2354 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 SDK2Q58EX2 2172 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 RNF222A6NCQ9 220 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 POM121CA8CG34 1229 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 EEF1E1-BLOC1S5C9J1V9 151 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 LINC01387J3KSC0 135 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 CRHP06850 196 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 RFPL3SP0C7P2 107 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 MTCP1P56278 107 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 DMRTC1Q5HYR2 192 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 TIPARPQ7Z3E1 657 aaKnown RBP19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 OR10K1Q8NGX5 313 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 LOXL4Q96JB6 756 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 P4HTMQ9NXG6 502 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 OSGIN2Q9Y236 505 aa19.44■□□□□ 0.7
NKX2-1-201ENST00000354822 OR6C6A6NF89 314 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 A8MXK9 166 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 HPNP05981 417 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 CNR1P21554 472 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 NTF4P34130 210 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 SERPINF1P36955 418 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 ECI1P42126 302 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 KRTAP27-1Q3LI81 207 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 PDSS1Q5T2R2 415 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 ZNF774Q6NX45 483 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 DTX1Q86Y01 620 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 ROBO4Q8WZ75 1007 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 CPNE4Q96A23 557 aaPredicted RBP19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 CCDC120Q96HB5 630 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 METTL9Q9H1A3 318 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 PPA2Q9H2U2 334 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 RGCCQ9H4X1 137 aa19.43■□□□□ 0.7
NKX2-1-201ENST00000354822 CHMP1AQ9HD42 196 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms