RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 OR10J6PQ8NGY7 276 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 RHOXF1Q8NHV9 184 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 HAUS1Q96CS2 278 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 RBBP8Q99708 897 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 CTRCQ99895 268 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 SH3GL3Q99963 347 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 RASL11BQ9BPW5 248 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 EBF4Q9BQW3 602 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 AGMATQ9BSE5 352 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 RIOK2Q9BVS4 552 aaKnown RBP1.18□□□□□ -2.22
BRCA1-202ENST00000354071 OSBPL11Q9BXB4 747 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 POTEKPQ9BYX7 375 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 BARHL1Q9BZE3 327 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 PLA2G2FQ9BZM2 168 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF442Q9H7R0 627 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 MAT2BQ9NZL9 334 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 MDFICQ9P1T7 246 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 FREM2Q5SZK8 3169 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 JMJD1CQ15652 2540 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 NSD3Q9BZ95 1437 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 A0A0A6YYD5 115 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 A0A1W2PRF3 423 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 A0A1W2PRM7 423 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 SMIM23A6NLE4 172 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 PRSS44E7EML9 344 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 KRTAP4-16G5E9R7 235 aaPredicted RBP1.18□□□□□ -2.22
BRCA1-202ENST00000354071 TXNDC9O14530 226 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 LYPLA1O75608 230 aaPredicted RBP1.18□□□□□ -2.22
BRCA1-202ENST00000354071 C6orf47O95873 294 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 SEMG1P04279 462 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 P0C879 139 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 PNMA6AP0CW24 399 aaPredicted RBP1.18□□□□□ -2.22
BRCA1-202ENST00000354071 GLP1RP43220 463 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 CRISP3P54108 245 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 TAS2R19P59542 299 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 GUSBP1Q15486 140 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 TCTEX1D4Q5JR98 221 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 MBOAT2Q6ZWT7 520 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 TMEM179BQ7Z7N9 219 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 OR51S1Q8NGJ8 323 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 C7orf33Q8WU49 177 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 TSC22D3Q99576 134 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 ARV1Q9H2C2 271 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 OR51B5Q9H339 312 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 REEP1Q9H902 201 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 TMBIM4Q9HC24 238 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 DMAP1Q9NPF5 467 aaPredicted RBP1.18□□□□□ -2.22
BRCA1-202ENST00000354071 TXLNGQ9NUQ3 528 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 RAI1Q7Z5J4 1906 aaPredicted RBP1.18□□□□□ -2.22
BRCA1-202ENST00000354071 NFASCO94856 1347 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 SPTBN4Q9H254 2564 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 PXDNQ92626 1479 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 A0A0B4J2E0 115 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 ZFP92A6NM28 416 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 PRMT5O14744 637 aaPredicted RBP1.18□□□□□ -2.22
BRCA1-202ENST00000354071 KLHL2O95198 593 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 IGKV5-2P06315 115 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 RPSAP08865 295 aaKnown RBP1.18□□□□□ -2.22
BRCA1-202ENST00000354071 CD1EP15812 388 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 PSMB6P28072 239 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 LOXP28300 417 aaPredicted RBP1.18□□□□□ -2.22
BRCA1-202ENST00000354071 CEACAM6P40199 344 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 TNFSF9P41273 254 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 BASP1P80723 227 aaKnown RBP1.18□□□□□ -2.22
BRCA1-202ENST00000354071 SLC7A9P82251 487 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 SNCBQ16143 134 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 PSG3Q16557 428 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 TMPRSS11AQ6ZMR5 421 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF440Q8IYI8 595 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 RIBC1Q8N443 379 aaPredicted RBP1.18□□□□□ -2.22
BRCA1-202ENST00000354071 NPWQ8N729 165 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 SFXN5Q8TD22 340 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 FAM19A4Q96LR4 140 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 LINC00479Q96M42 142 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 SERPINB11Q96P15 392 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 SELENOSQ9BQE4 189 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 C19orf24Q9BVV8 132 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 SLC19A3Q9BZV2 496 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 SPNS1Q9H2V7 528 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 FBXL15Q9H469 300 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 ARMC7Q9H6L4 198 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 MYOZ1Q9NP98 299 aaPredicted RBP1.18□□□□□ -2.22
BRCA1-202ENST00000354071 IL26Q9NPH9 171 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 EXD2Q9NVH0 621 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 MARCH5Q9NX47 278 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 PSG8Q9UQ74 426 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 TET2Q6N021 2002 aaPredicted RBP1.18□□□□□ -2.22
BRCA1-202ENST00000354071 LYRM9A8MSI8 78 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 MKRN2OSH3BPM6 223 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 KLRC4-KLRK1H3BQV0 150 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 KRT75O95678 551 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 IGKV3-20P01619 116 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 OR8U9P0C7N5 309 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CALM1P0DP23 149 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CALM2P0DP24 149 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CALM3P0DP25 149 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 FOXN2P32314 431 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CRATP43155 626 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CLDN12P56749 244 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 ORC2Q13416 577 aaPredicted RBP1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms