RNA–Protein interactions for RNA: ENST00000353334.10

CD74-202, Transcript of CD74 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD74, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-202ENST00000353334 WIPF1O43516 503 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 OR2T1O43869 369 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 GGCTO75223 188 aaKnown RBP11.52□□□□□ -0.57
CD74-202ENST00000353334 KHDRBS3O75525 346 aaKnown RBP11.52□□□□□ -0.57
CD74-202ENST00000353334 MED6O75586 246 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 SIX6O95475 246 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 PLGP00747 810 aaPredicted RBP11.52□□□□□ -0.57
CD74-202ENST00000353334 IGKV1D-16P01601 117 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 OPN1LWP04000 364 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 CRHP06850 196 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 ADRA2AP08913 450 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 DAOP14920 347 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 ACVR1BP36896 505 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 MMP15P51511 669 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 LSM11P83369 360 aaKnown RBP eCLIP11.52□□□□□ -0.57
CD74-202ENST00000353334 BEX5Q5H9J7 111 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 HIST2H3PS2Q5TEC6 136 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 EIF5AL1Q6IS14 154 aaKnown RBP11.52□□□□□ -0.57
CD74-202ENST00000353334 SLC30A6Q6NXT4 461 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 SMARCD3Q6STE5 483 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 WDR88Q6ZMY6 472 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 HMGN2P46Q86SG4 172 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 TGIF2LXQ8IUE1 241 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 CBLN2Q8IUK8 224 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 ZNF485Q8NCK3 441 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 DNAAF1Q8NEP3 725 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 GATAD2BQ8WXI9 593 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 BPIFA2Q96DR5 249 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 RNFT2Q96EX2 444 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 RRNAD1Q96FB5 475 aaKnown RBP11.52□□□□□ -0.57
CD74-202ENST00000353334 CMC2Q9NRP2 79 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 UBQLN4Q9NRR5 601 aa11.52□□□□□ -0.57
CD74-202ENST00000353334 GAR1Q9NY12 217 aaKnown RBP11.52□□□□□ -0.57
CD74-202ENST00000353334 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.51□□□□□ -0.577e-40■■■■■ 28.4
CD74-202ENST00000353334 A0A087WUJ7 227 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 ELOA3CA0A087WX78 387 aaPredicted RBP11.51□□□□□ -0.57
CD74-202ENST00000353334 A0A1B0GWA3 101 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 A0A1W2PQD3 144 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 KANTRA0A1W2PQU2 76 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 SLC22A31A6NKX4 558 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 POM121CA8CG34 1229 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 LRRN3E7EW58 273 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 ITGB1BP1O14713 200 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 TMEM127O75204 238 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 CBR3O75828 277 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 UBL3O95164 117 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 HOXB5P09067 269 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 METTL15P1P0C7V9 234 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 FAM157CP0CG43 387 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 HOXA5P20719 270 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 GLP1RP43220 463 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 GPR4P46093 362 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 CDX1P47902 265 aaPredicted RBP11.51□□□□□ -0.57
CD74-202ENST00000353334 MTNR1BP49286 362 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 CCR9P51686 369 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 CDH11P55287 796 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 ZP1P60852 638 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 RPS4XP62701 263 aaKnown RBP11.51□□□□□ -0.57
CD74-202ENST00000353334 OR2A2Q6IF42 318 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 C11orf88Q6PI97 169 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 ZAR1Q86SH2 424 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 ZNF611Q8N823 705 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 C15orf40Q8WUR7 153 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 PLPPR2Q96GM1 343 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 C19orf24Q9BVV8 132 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 C20orf85Q9H1P6 137 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 BARX1Q9HBU1 254 aaPredicted RBP11.51□□□□□ -0.57
CD74-202ENST00000353334 FLRT3Q9NZU0 649 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 H2AFY2Q9P0M6 372 aaPredicted RBP11.51□□□□□ -0.57
CD74-202ENST00000353334 GOLT1BQ9Y3E0 138 aa11.51□□□□□ -0.57
CD74-202ENST00000353334 C17orf51A8MQB3 221 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 PRSS47A8MTI9 375 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 PIP5K1CO60331 668 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 OR2F2O95006 317 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 LY86O95711 162 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 PNMTP11086 282 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 GIFP27352 417 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 MPGP29372 298 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 SLC6A6P31641 620 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 CDKN1AP38936 164 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 SLC6A8P48029 635 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 SELENOPP49908 381 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 MECP2P51608 486 aaKnown RBP11.5□□□□□ -0.57
CD74-202ENST00000353334 FXYD6P3P58550 94 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 RAP1AP62834 184 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 RPP30P78346 268 aaKnown RBP11.5□□□□□ -0.57
CD74-202ENST00000353334 PLCXD2Q0VAA5 305 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 SNTB2Q13425 540 aaKnown RBP11.5□□□□□ -0.57
CD74-202ENST00000353334 OR2F1Q13607 317 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 ZNF345Q14585 488 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 USF2Q15853 346 aaPredicted RBP11.5□□□□□ -0.57
CD74-202ENST00000353334 ALG10BQ5I7T1 473 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 TMEM244Q5VVB8 128 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 LIPKQ5VXJ0 399 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 HBMQ6B0K9 141 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 GLDNQ6ZMI3 551 aaPredicted RBP11.5□□□□□ -0.57
CD74-202ENST00000353334 WFDC8Q8IUA0 241 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 OR5R1Q8NH85 324 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 TMEM203Q969S6 136 aa11.5□□□□□ -0.57
CD74-202ENST00000353334 SAMD8Q96LT4 415 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms