RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 OR13G1Q8NGZ3 307 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 KCNE4Q8WWG9 221 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 ZNF471Q9BX82 626 aaPredicted RBP19.36■□□□□ 0.69
UPF3A-201ENST00000351487 SHARPINQ9H0F6 387 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 BARX1Q9HBU1 254 aaPredicted RBP19.36■□□□□ 0.69
UPF3A-201ENST00000351487 GPR160Q9UJ42 338 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 LOC105371267A0A1B0GV96 52 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 C5orf51A6NDU8 294 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 MASP2O00187 686 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 SNU13P55769 128 aaKnown RBP19.36■□□□□ 0.69
UPF3A-201ENST00000351487 SNAI3Q3KNW1 292 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 AADACL3Q5VUY0 350 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 DRAM2Q6UX65 266 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 Q7L0L9 218 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 RHBDD1Q8TEB9 315 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 ZNF75AQ96N20 296 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 RTBDNQ9BSG5 229 aaPredicted RBP19.36■□□□□ 0.69
UPF3A-201ENST00000351487 RAB18Q9NP72 206 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 B4E171 279 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 TSPAN7P41732 249 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 OR3A2P47893 321 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 SUPT4H1P63272 117 aaKnown RBP19.35■□□□□ 0.69
UPF3A-201ENST00000351487 TRIM61Q5EBN2 209 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 CLEC18BQ6UXF7 455 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 OR10K1Q8NGX5 313 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 S100A13Q99584 98 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 CDC6Q99741 560 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 A0A0G2JMM0 328 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 A0A1W2PPB8 328 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 A0A1W2PRS3 328 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 KIR3DP1A8MWS1 328 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 LAMTOR5O43504 91 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 SYNGR3O43761 229 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 BEX5Q5H9J7 111 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 FAM74A1Q5RGS3 127 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 PPP1R32Q7Z5V6 425 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 GGNQ86UU5 652 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 CSNK2A3Q8NEV1 391 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 PIGTQ969N2 578 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 SGK3Q96BR1 496 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 ARPC5LQ9BPX5 153 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 ST6GALNAC5Q9BVH7 336 aa19.35■□□□□ 0.69
UPF3A-201ENST00000351487 SGCEO43556 437 aa19.34■□□□□ 0.69
UPF3A-201ENST00000351487 P04436 131 aa19.34■□□□□ 0.69
UPF3A-201ENST00000351487 CST2P09228 141 aa19.34■□□□□ 0.69
UPF3A-201ENST00000351487 STARP49675 285 aa19.34■□□□□ 0.69
UPF3A-201ENST00000351487 OR5AP2Q8NGF4 316 aa19.34■□□□□ 0.69
UPF3A-201ENST00000351487 C13orf42A0A1B0GVH6 325 aa19.33■□□□□ 0.69
UPF3A-201ENST00000351487 ZNF716A6NP11 495 aa19.33■□□□□ 0.69
UPF3A-201ENST00000351487 TEX46H3BTG2 121 aa19.33■□□□□ 0.69
UPF3A-201ENST00000351487 LGALS8O00214 317 aa19.33■□□□□ 0.69
UPF3A-201ENST00000351487 SURF2Q15527 256 aaPredicted RBP19.33■□□□□ 0.69
UPF3A-201ENST00000351487 ZNF528Q3MIS6 628 aa19.33■□□□□ 0.69
UPF3A-201ENST00000351487 SULF2Q8IWU5 870 aa19.33■□□□□ 0.69
UPF3A-201ENST00000351487 SEMA6DQ8NFY4 1073 aa19.33■□□□□ 0.69
UPF3A-201ENST00000351487 SPSB1Q96BD6 273 aa19.33■□□□□ 0.69
UPF3A-201ENST00000351487 TMEM38BQ9NVV0 291 aa19.33■□□□□ 0.69
UPF3A-201ENST00000351487 EHFQ9NZC4 300 aa19.33■□□□□ 0.69
UPF3A-201ENST00000351487 CSAG2Q9Y5P2 127 aa19.33■□□□□ 0.69
UPF3A-201ENST00000351487 ICAM2P13598 275 aa19.33■□□□□ 0.68
UPF3A-201ENST00000351487 SLC23A3Q6PIS1 610 aa19.33■□□□□ 0.68
UPF3A-201ENST00000351487 YRDCQ86U90 279 aaKnown RBP19.33■□□□□ 0.68
UPF3A-201ENST00000351487 Q96M66 194 aa19.33■□□□□ 0.68
UPF3A-201ENST00000351487 NECAB3Q96P71 396 aaPredicted RBP19.33■□□□□ 0.68
UPF3A-201ENST00000351487 COQ3Q9NZJ6 369 aa19.33■□□□□ 0.68
UPF3A-201ENST00000351487 RPS2P15880 293 aaKnown RBP19.32■□□□□ 0.68
UPF3A-201ENST00000351487 NTF4P34130 210 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 Q0VFX4 171 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 SNTB1Q13884 538 aaKnown RBP19.32■□□□□ 0.68
UPF3A-201ENST00000351487 PAN3Q58A45 887 aaKnown RBP19.32■□□□□ 0.68
UPF3A-201ENST00000351487 OR14L1PQ8NHC6 308 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 STOML3Q8TAV4 291 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 CPT1CQ8TCG5 803 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 RNF126Q9BV68 326 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 CCDC187A0A096LP49 1063 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 TEX13DA0A0J9YY54 714 aaPredicted RBP19.32■□□□□ 0.68
UPF3A-201ENST00000351487 LRRC3CA6NJW4 275 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 F8VVB4 439 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 F8VWA3 439 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 ACKR3P25106 362 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 CARD18P57730 90 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 SCRN3Q0VDG4 424 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 SLC9A3R2Q15599 337 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 KRTAP27-1Q3LI81 207 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 ABLIM2Q6H8Q1 611 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 H3F3CQ6NXT2 135 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 GALNTL5Q7Z4T8 443 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.32■□□□□ 0.68
UPF3A-201ENST00000351487 MRPS24Q96EL2 167 aaKnown RBP19.32■□□□□ 0.68
UPF3A-201ENST00000351487 CRLF2Q9HC73 371 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 GLS2Q9UI32 602 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 TCFL5Q9UL49 500 aa19.32■□□□□ 0.68
UPF3A-201ENST00000351487 F5H0A9 414 aaPredicted RBP19.31■□□□□ 0.68
UPF3A-201ENST00000351487 BET1O15155 118 aa19.31■□□□□ 0.68
UPF3A-201ENST00000351487 HTR3BO95264 441 aa19.31■□□□□ 0.68
UPF3A-201ENST00000351487 LYL1P12980 280 aa19.31■□□□□ 0.68
UPF3A-201ENST00000351487 PI3P19957 117 aa19.31■□□□□ 0.68
UPF3A-201ENST00000351487 CNR1P21554 472 aa19.31■□□□□ 0.68
UPF3A-201ENST00000351487 TAGLNQ01995 201 aaKnown RBP19.31■□□□□ 0.68
UPF3A-201ENST00000351487 OR1F12Q8NHA8 337 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms