RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 NICN1Q9BSH3 213 aa6□□□□□ -1.45
TRIM55-203ENST00000350034 REPIN1Q9BWE0 567 aaKnown RBP6□□□□□ -1.45
TRIM55-203ENST00000350034 TMEM59Q9BXS4 323 aa6□□□□□ -1.45
TRIM55-203ENST00000350034 SELENOIQ9C0D9 397 aa6□□□□□ -1.45
TRIM55-203ENST00000350034 ALX4Q9H161 411 aaPredicted RBP6□□□□□ -1.45
TRIM55-203ENST00000350034 MED28Q9H204 178 aa6□□□□□ -1.45
TRIM55-203ENST00000350034 OR10A4Q9H209 315 aa6□□□□□ -1.45
TRIM55-203ENST00000350034 TP63Q9H3D4 680 aaPredicted RBP6□□□□□ -1.45
TRIM55-203ENST00000350034 ZMAT3Q9HA38 289 aaKnown RBP6□□□□□ -1.45
TRIM55-203ENST00000350034 MYOZ1Q9NP98 299 aaPredicted RBP6□□□□□ -1.45
TRIM55-203ENST00000350034 ING3Q9NXR8 418 aa6□□□□□ -1.45
TRIM55-203ENST00000350034 SLC2A8Q9NY64 477 aa6□□□□□ -1.45
TRIM55-203ENST00000350034 UPB1Q9UBR1 384 aa6□□□□□ -1.45
TRIM55-203ENST00000350034 KCNK7Q9Y2U2 307 aa6□□□□□ -1.45
TRIM55-203ENST00000350034 IGKV1-27A0A075B6S5 117 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 MEIKINA0A087WXM9 373 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 A0A096LPE4 126 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 ZNF816-ZNF321PA0A0X1KG74 233 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 A0A1W2PP11 408 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 A0A1W2PPZ6 126 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 OR14I1A6ND48 311 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 MEIS3P1A6NDR6 274 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 C1QTNF9BB2RNN3 333 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 ZNF736B4DX44 427 aaPredicted RBP5.99□□□□□ -1.45
TRIM55-203ENST00000350034 PYCARD-AS1I3L0S3 204 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 SOCS1O15524 211 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 RAD51DO75771 328 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 CNOT4O95628 575 aaKnown RBP5.99□□□□□ -1.45
TRIM55-203ENST00000350034 RAB3DO95716 219 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 NRASP01111 189 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 SERPINA5P05154 406 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 C1QTNF9P0C862 333 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 VSIG10L2P0DP72 767 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 PLA2G2AP14555 144 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 TBPP20226 339 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 ERP29P30040 261 aaKnown RBP5.99□□□□□ -1.45
TRIM55-203ENST00000350034 RAD52P43351 418 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 VEGFCP49767 419 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 MEF2DQ14814 521 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 ZMYND11Q15326 602 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 CNN3Q15417 329 aaKnown RBP5.99□□□□□ -1.45
TRIM55-203ENST00000350034 C9orf135Q5VTT2 229 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 ZNF626Q68DY1 528 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 TMEM53Q6P2H8 277 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 TFAP2EQ6VUC0 442 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 ZNF782Q6ZMW2 699 aaPredicted RBP5.99□□□□□ -1.45
TRIM55-203ENST00000350034 Q6ZS92 163 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 LHFPL2Q6ZUX7 228 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 RTN4RL2Q86UN3 420 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 ZNF584Q8IVC4 421 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 ZADH2Q8N4Q0 377 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 CHST4Q8NCG5 386 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 Q8NFD4 153 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 PXT1Q8NFP0 134 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 STEAP2Q8NFT2 490 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 OR56B1Q8NGI3 324 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 OR51S1Q8NGJ8 323 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 TNFAIP8L1Q8WVP5 186 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 ST8SIA4Q92187 359 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 DVL3Q92997 716 aaPredicted RBP5.99□□□□□ -1.45
TRIM55-203ENST00000350034 WNT2BQ93097 391 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 PIGTQ969N2 578 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 APOBEC3DQ96AK3 386 aaPredicted RBP5.99□□□□□ -1.45
TRIM55-203ENST00000350034 SARAFQ96BY9 339 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 RAB3CQ96E17 227 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 POM121Q96HA1 1249 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 TECTBQ96PL2 329 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 TAAR6Q96RI8 345 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 GPER1Q99527 375 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 SLC25A21Q9BQT8 299 aaPredicted RBP5.99□□□□□ -1.45
TRIM55-203ENST00000350034 URM1Q9BTM9 101 aaKnown RBP5.99□□□□□ -1.45
TRIM55-203ENST00000350034 BEX2Q9BXY8 128 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 CST11Q9H112 138 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 BANF2Q9H503 90 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 GPR173Q9NS66 373 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 NKIRAS2Q9NYR9 191 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 PTTG3PQ9NZH4 202 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 IL36GQ9NZH8 169 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 ING4Q9UNL4 249 aa5.99□□□□□ -1.45
TRIM55-203ENST00000350034 DMXL2Q8TDJ6 3036 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 AHRRA9YTQ3 701 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 RGS13O14921 159 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 AKR7A2O43488 359 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 CRTAPO75718 401 aaPredicted RBP5.98□□□□□ -1.45
TRIM55-203ENST00000350034 CYB5AP00167 134 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 CST4P01036 141 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 ANXA3P12429 323 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 HOXB1P14653 301 aaPredicted RBP5.98□□□□□ -1.45
TRIM55-203ENST00000350034 MGMTP16455 207 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 GNB3P16520 340 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 CXCL3P19876 107 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 ANXA7P20073 488 aaKnown RBP5.98□□□□□ -1.45
TRIM55-203ENST00000350034 EIF2S3P41091 472 aaKnown RBP5.98□□□□□ -1.45
TRIM55-203ENST00000350034 CBX5P45973 191 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 FUT6P51993 359 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 MTCP1P56278 107 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 RAB1AP62820 205 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 ZNF169Q14929 603 aaPredicted RBP5.98□□□□□ -1.45
TRIM55-203ENST00000350034 ARL6IP1Q15041 203 aa5.98□□□□□ -1.45
TRIM55-203ENST00000350034 PPA1Q15181 289 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms