RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 HCKP08631 526 aa16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 DANCRP0C864 163 aa16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 CD37P11049 281 aa16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 RAB3BP20337 219 aa16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 HNRNPA0Q13151 305 aaKnown RBP16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 CEACAM21Q3KPI0 293 aa16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 DDI2Q5TDH0 399 aa16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 FBXL14Q8N1E6 418 aa16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 OR2Z1Q8NG97 314 aa16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 DYNC2LI1Q8TCX1 351 aa16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 RNF170Q96K19 258 aa16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 DCHS2Q6V1P9 2916 aa16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 CHD3Q12873 2000 aaKnown RBP16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 LOC100289279A0A1B0GTE1 492 aa16.14■□□□□ 0.17
CHMP4A-201ENST00000347519 PQLC2LA1A4F0 135 aa16.14■□□□□ 0.17
CHMP4A-201ENST00000347519 ZNF732B4DXR9 585 aa16.14■□□□□ 0.17
CHMP4A-201ENST00000347519 IGHV1-46P01743 117 aa16.14■□□□□ 0.17
CHMP4A-201ENST00000347519 ALDOBP05062 364 aa16.14■□□□□ 0.17
CHMP4A-201ENST00000347519 RBMXP38159 391 aaKnown RBP16.14■□□□□ 0.17
CHMP4A-201ENST00000347519 ZNF81P51508 661 aa16.14■□□□□ 0.17
CHMP4A-201ENST00000347519 GPM6AP51674 278 aa16.14■□□□□ 0.17
CHMP4A-201ENST00000347519 TLE4Q04727 773 aa16.14■□□□□ 0.17
CHMP4A-201ENST00000347519 MAB21L1Q13394 359 aa16.14■□□□□ 0.17
CHMP4A-201ENST00000347519 CNN3Q15417 329 aaKnown RBP16.14■□□□□ 0.17
CHMP4A-201ENST00000347519 C11orf71Q6IPW1 123 aa16.14■□□□□ 0.17
CHMP4A-201ENST00000347519 TPRA1Q86W33 373 aa16.14■□□□□ 0.17
CHMP4A-201ENST00000347519 PLEKHF2Q9H8W4 249 aa16.14■□□□□ 0.17
CHMP4A-201ENST00000347519 LRBAP50851 2863 aa16.14■□□□□ 0.17
CHMP4A-201ENST00000347519 SLC2A2P11168 524 aaPredicted RBP16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 ZNF182P17025 639 aaPredicted RBP16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 PRKACBP22694 351 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 FUT6P51993 359 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 ANGPTL5Q86XS5 388 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 ZNF611Q8N823 705 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 OR5A2Q8NGI9 324 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 OR8S1Q8NH09 359 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 SPSB1Q96BD6 273 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 ELMOD3Q96FG2 381 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 DCUN1D5Q9BTE7 237 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 CLEC4MQ9H2X3 399 aaPredicted RBP16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 SLC7A11Q9UPY5 501 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 V9GY05 133 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 CACNA1DQ01668 2161 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 PLSCR5A0PG75 271 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 MEGF11A6BM72 1044 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 ANXA2P2A6NMY6 339 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 C17orf100A8MU93 164 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 M0R233 179 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 PDCD5O14737 125 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 KISS1Q15726 138 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 MOGQ16653 247 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 CNPY1Q3B7I2 92 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 HES5Q5TA89 166 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 PRAMEF6Q5VXH4 476 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 DTX2Q86UW9 622 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 CALHM1Q8IU99 346 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 JAGN1Q8N5M9 183 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 OR5D18Q8NGL1 313 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 SLC25A46Q96AG3 418 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 BORCS8Q96FH0 119 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 TECTBQ96PL2 329 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 HIST1H2AAQ96QV6 131 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 MICU1Q9BPX6 476 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 TRAF4Q9BUZ4 470 aaPredicted RBP16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 SLC22A4Q9H015 551 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 CXXC4Q9H2H0 198 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 CNTD2Q9H8S5 307 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 CYSLTR2Q9NS75 346 aa16.13■□□□□ 0.17
CHMP4A-201ENST00000347519 DSCAMO60469 2012 aa16.12■□□□□ 0.17
CHMP4A-201ENST00000347519 A0A0B4J203 849 aa16.12■□□□□ 0.17
CHMP4A-201ENST00000347519 OCMP0CE72 109 aaPredicted RBP16.12■□□□□ 0.17
CHMP4A-201ENST00000347519 ZNF93P35789 620 aaPredicted RBP16.12■□□□□ 0.17
CHMP4A-201ENST00000347519 OR3A4PP47883 348 aa16.12■□□□□ 0.17
CHMP4A-201ENST00000347519 MTCP1P56278 107 aa16.12■□□□□ 0.17
CHMP4A-201ENST00000347519 CLDN12P56749 244 aa16.12■□□□□ 0.17
CHMP4A-201ENST00000347519 ZP1P60852 638 aa16.12■□□□□ 0.17
CHMP4A-201ENST00000347519 C1orf100Q5SVJ3 147 aa16.12■□□□□ 0.17
CHMP4A-201ENST00000347519 FAM166AQ6J272 317 aa16.12■□□□□ 0.17
CHMP4A-201ENST00000347519 C1QL2Q7Z5L3 287 aa16.12■□□□□ 0.17
CHMP4A-201ENST00000347519 OR4D6Q8NGJ1 314 aa16.12■□□□□ 0.17
CHMP4A-201ENST00000347519 RTL8AQ9BWD3 113 aa16.12■□□□□ 0.17
CHMP4A-201ENST00000347519 METTL17Q9H7H0 456 aaPredicted RBP16.12■□□□□ 0.17
CHMP4A-201ENST00000347519 ABCB9Q9NP78 766 aa16.12■□□□□ 0.17
CHMP4A-201ENST00000347519 DYNLRB1Q9NP97 96 aa16.12■□□□□ 0.17
CHMP4A-201ENST00000347519 CBLN4Q9NTU7 201 aa16.12■□□□□ 0.17
CHMP4A-201ENST00000347519 PMF1-BGLAPU3KQ54 211 aa16.12■□□□□ 0.17
CHMP4A-201ENST00000347519 OR5B21A6NL26 309 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 NOTOA8MTQ0 251 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 C3orf80F5H4A9 247 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 PLATP00750 562 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 GRPP07492 148 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 ERCC1P07992 297 aaPredicted RBP16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 CD200P41217 278 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 RBP2P50120 134 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 ATP1B3P54709 279 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 GNG3P63215 75 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 AGAP6Q5VW22 663 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 GLT8D1Q68CQ7 371 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 SFXN4Q6P4A7 337 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 LHFPL2Q6ZUX7 228 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms