RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 OR4A8P0C604 315 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 SLC35G6P0C7Q6 338 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 ZNF888P0CJ79 500 aaPredicted RBP16.39■□□□□ 0.21
SMPD1-201ENST00000342245 CEBPGP53567 150 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 TEX38Q6PEX7 206 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 TGIF2LYQ8IUE0 185 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 SLC26A10Q8NG04 563 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 PCED1AQ9H1Q7 454 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 LOC107986453A0A1B0GWG9 222 aa16.38■□□□□ 0.21
SMPD1-201ENST00000342245 A0A1W2PPQ1 181 aa16.38■□□□□ 0.21
SMPD1-201ENST00000342245 HLA-DQA2P01906 255 aa16.38■□□□□ 0.21
SMPD1-201ENST00000342245 ASAH2BP0C7U1 165 aa16.38■□□□□ 0.21
SMPD1-201ENST00000342245 HIST1H1DP16402 221 aaKnown RBP16.38■□□□□ 0.21
SMPD1-201ENST00000342245 FUT3P21217 361 aa16.38■□□□□ 0.21
SMPD1-201ENST00000342245 ZNF10P21506 573 aaPredicted RBP16.38■□□□□ 0.21
SMPD1-201ENST00000342245 RAB38P57729 211 aa16.38■□□□□ 0.21
SMPD1-201ENST00000342245 HSF1Q00613 529 aa16.38■□□□□ 0.21
SMPD1-201ENST00000342245 ADAMTSL4Q6UY14 1074 aa16.38■□□□□ 0.21
SMPD1-201ENST00000342245 CAPN10Q9HC96 672 aa16.38■□□□□ 0.21
SMPD1-201ENST00000342245 LIPGQ9Y5X9 500 aa16.38■□□□□ 0.21
SMPD1-201ENST00000342245 PGA3P0DJD8 388 aa16.38■□□□□ 0.21
SMPD1-201ENST00000342245 FGF5P12034 268 aa16.38■□□□□ 0.21
SMPD1-201ENST00000342245 RPS15AP62244 130 aaKnown RBP16.38■□□□□ 0.21
SMPD1-201ENST00000342245 RBX1P62877 108 aa16.38■□□□□ 0.21
SMPD1-201ENST00000342245 DPPA3Q6W0C5 159 aa16.38■□□□□ 0.21
SMPD1-201ENST00000342245 URM1Q9BTM9 101 aaKnown RBP16.38■□□□□ 0.21
SMPD1-201ENST00000342245 LPAR2Q9HBW0 351 aa16.38■□□□□ 0.21
SMPD1-201ENST00000342245 DAPP1Q9UN19 280 aa16.38■□□□□ 0.21
SMPD1-201ENST00000342245 GAB2Q9UQC2 676 aa16.38■□□□□ 0.21
SMPD1-201ENST00000342245 IGKV1D-42A0A075B6H8 117 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 A0A1B0GV50 99 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 A6NNC1 897 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 H7C1C5 153 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 HOXA2O43364 376 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 SCGB1D2O95969 90 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 SELPP16109 830 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 GJA4P35212 333 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 LCN6P62502 163 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 PRICKLE4Q2TBC4 344 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 C1QL3Q5VWW1 255 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 CACUL1Q86Y37 369 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 FAM185AQ8N0U4 392 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 OR52N4Q8NGI2 321 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 PPP1R14AQ96A00 147 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 HIST1H2AAQ96QV6 131 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 OR51B6Q9H340 312 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 MMP25Q9NPA2 562 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 B9D1Q9UPM9 204 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 SPACA6W5XKT8 324 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 NSG1A0A0A6YYJ2 146 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 MBPP02686 304 aaPredicted RBP16.37■□□□□ 0.21
SMPD1-201ENST00000342245 OR10J1P30954 320 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 PTGER4P35408 488 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 POLR2HP52434 150 aaKnown RBP16.37■□□□□ 0.21
SMPD1-201ENST00000342245 CCL20P78556 96 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 SP5Q6BEB4 398 aaPredicted RBP16.37■□□□□ 0.21
SMPD1-201ENST00000342245 OR2G3Q8NGZ4 309 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 C8orf44Q96CB5 159 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 ZPBPQ9BS86 351 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 CHST11Q9NPF2 352 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 SEMA5BQ9P283 1151 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 AK3Q9UIJ7 227 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 LRP12Q9Y561 859 aa16.37■□□□□ 0.21
SMPD1-201ENST00000342245 DHRS7CA6NNS2 312 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 GRXCR1A8MXD5 290 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 SPINT1O43278 529 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 NSA2O95478 260 aaKnown RBP16.36■□□□□ 0.21
SMPD1-201ENST00000342245 PRNPP04156 253 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 CSNK1A1P48729 337 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 GABREP78334 506 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 RPL18Q07020 188 aaKnown RBP16.36■□□□□ 0.21
SMPD1-201ENST00000342245 ENPP2Q13822 863 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 LCN10Q6JVE6 187 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 GALNTL5Q7Z4T8 443 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 ZNF761Q86XN6 746 aaPredicted RBP16.36■□□□□ 0.21
SMPD1-201ENST00000342245 MRPL41Q8IXM3 137 aaKnown RBP16.36■□□□□ 0.21
SMPD1-201ENST00000342245 GAL3ST4Q96RP7 486 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 GPR84Q9NQS5 396 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 GPR173Q9NS66 373 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 P4HTMQ9NXG6 502 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 LRRK1Q38SD2 2015 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 SRSF10O75494 262 aaKnown RBP16.36■□□□□ 0.21
SMPD1-201ENST00000342245 EFEMP2O95967 443 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 ALDH3B1P43353 468 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 SOX8P57073 446 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 COL10A1Q03692 680 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 SGCGQ13326 291 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 C1orf140Q5VVS0 124 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 NCR3LG1Q68D85 454 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 WBP2NLQ6ICG8 309 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 TMEM25Q86YD3 366 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 NPAS4Q8IUM7 802 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 PYGO2Q9BRQ0 406 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 VN1R3Q9BXE9 311 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 ZNF700Q9H0M5 742 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 LYRM4Q9HD34 91 aa16.36■□□□□ 0.21
SMPD1-201ENST00000342245 CSTAP01040 98 aa16.35■□□□□ 0.21
SMPD1-201ENST00000342245 CTSDP07339 412 aaPredicted RBP16.35■□□□□ 0.21
SMPD1-201ENST00000342245 CDKN1BP46527 198 aa16.35■□□□□ 0.21
SMPD1-201ENST00000342245 EXOSC7Q15024 291 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms