RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 LALBAP00709 142 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 TPTEP56180 551 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 VBP1P61758 197 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 NCS1P62166 190 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 DGCR2P98153 550 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 IFITM2Q01629 132 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 OR7E24Q6IFN5 339 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 RFPL4BQ6ZWI9 263 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 NUFIP2Q7Z417 695 aaKnown RBP5.54□□□□□ -1.52
CSTF3-201ENST00000323959 CDH26Q8IXH8 852 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 RNF128Q8TEB7 428 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 R3HDM4Q96D70 268 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 PELI1Q96FA3 418 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 SLC25A44Q96H78 314 aaPredicted RBP5.54□□□□□ -1.52
CSTF3-201ENST00000323959 OR8B4Q96RC9 309 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 ASCL2Q99929 193 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 KCNS3Q9BQ31 491 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 CENPOQ9BU64 300 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 DNAH11Q96DT5 4516 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 TRBV5-7A0A0A0MS05 114 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 OR2M5A3KFT3 312 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 FAM183AA6NL82 134 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 LRRN3E7EW58 273 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 LOC110117498-PIK3R3F6TDL0 507 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 LYNX1G3V0Z9 82 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 BLOC1S5-TXNDC5H3BN57 136 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 RPL36A-HNRNPH2H7BZ11 118 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 GABRPO00591 440 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 OR6A2O95222 327 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 LYNX1P0DP58 116 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 FSTP19883 344 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 IGHV1-2P23083 117 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 MAPK3P27361 379 aaPredicted RBP5.54□□□□□ -1.52
CSTF3-201ENST00000323959 MNDAP41218 407 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 PPP5CP53041 499 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 CLDN20P56880 219 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 GNG2P59768 71 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 RPS11P62280 158 aaKnown RBP eCLIP5.54□□□□□ -1.52
CSTF3-201ENST00000323959 FABP5Q01469 135 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 GLO1Q04760 184 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 ZNF181Q2M3W8 571 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 HACD4Q5VWC8 232 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 RAET1LQ5VY80 246 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 SLC35D2Q76EJ3 337 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 SYT9Q86SS6 491 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 TMEM123Q8N131 208 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 C1orf162Q8NEQ5 155 aaPredicted RBP5.54□□□□□ -1.52
CSTF3-201ENST00000323959 CAPSLQ8WWF8 208 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 TXNDC15Q96J42 360 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 ZMAT4Q9H898 229 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 TMEM212A6NML5 194 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 ZNF724A8MTY0 619 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 CYTIPO60759 359 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 IGHG1P01857 330 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 HLA-DQB1P01920 261 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 NPR2P20594 1047 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 GTF2E2P29084 291 aaKnown RBP5.53□□□□□ -1.52
CSTF3-201ENST00000323959 S100A5P33763 92 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 SLC17A1Q14916 467 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 SLC35F1Q5T1Q4 408 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 OR2G6Q5TZ20 316 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 KCTD18Q6PI47 426 aaPredicted RBP5.53□□□□□ -1.52
CSTF3-201ENST00000323959 AKAP14Q86UN6 197 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 LDLRAD3Q86YD5 345 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 GLB1L2Q8IW92 636 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 UEVLDQ8IX04 471 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 C20orf196Q8IYI0 205 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 ZNF679Q8IYX0 411 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 GPR148Q8TDV2 347 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 RNF133Q8WVZ7 376 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 ZNRF4Q8WWF5 429 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 GATAD2BQ8WXI9 593 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 RPL3LQ92901 407 aaKnown RBP5.53□□□□□ -1.52
CSTF3-201ENST00000323959 TRIM63Q969Q1 353 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 CPNE4Q96A23 557 aaPredicted RBP5.53□□□□□ -1.52
CSTF3-201ENST00000323959 ARL5BQ96KC2 179 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 MED20Q9H944 212 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 MRPL22Q9NWU5 206 aaKnown RBP5.53□□□□□ -1.52
CSTF3-201ENST00000323959 MDFIC2A0A1B0GVS7 189 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 RNASEK-C17orf49H0YIS7 233 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 RAMP3O60896 148 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 ARL6IP5O75915 188 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 IGLV3-1P01715 115 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 EIF1AXP47813 144 aaKnown RBP5.53□□□□□ -1.52
CSTF3-201ENST00000323959 RPS25P62851 125 aaKnown RBP5.53□□□□□ -1.52
CSTF3-201ENST00000323959 PPP3R1P63098 170 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 LIPKQ5VXJ0 399 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 HBMQ6B0K9 141 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 SLC18B1Q6NT16 456 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 BAIAP2L2Q6UXY1 529 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 CREB3L2Q70SY1 520 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 LHFPL3Q86UP9 236 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 OR10D3Q8NH80 312 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 OR2V1Q8NHB1 315 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 SETD6Q8TBK2 473 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 ST7LQ8TDW4 575 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 YIPF5Q969M3 257 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 C4orf36Q96KX1 117 aa5.53□□□□□ -1.52
CSTF3-201ENST00000323959 ISG20L2Q9H9L3 353 aaKnown RBP5.53□□□□□ -1.52
CSTF3-201ENST00000323959 TIGARQ9NQ88 270 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms