RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 RCC1P18754 421 aaPredicted RBP13.61□□□□□ -0.23
VARS2-201ENST00000321897 FASLGP48023 281 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 CCR5P51681 352 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 TESK1Q15569 626 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 GUK1Q16774 197 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 ZNF695Q8IW36 515 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 PLPP5Q8NEB5 264 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 LIN37Q96GY3 246 aaPredicted RBP13.61□□□□□ -0.23
VARS2-201ENST00000321897 NICN1Q9BSH3 213 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 ST6GALNAC2Q9UJ37 374 aa13.61□□□□□ -0.23
VARS2-201ENST00000321897 C7orf77A4D0Y5 90 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 TGFBR3LH3BV60 316 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 IL9P15248 144 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 HOXC12P31275 282 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 THBS2P35442 1172 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 ZNF121P58317 390 aaPredicted RBP13.6□□□□□ -0.23
VARS2-201ENST00000321897 TFAP2EQ6VUC0 442 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 SYT13Q7L8C5 426 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 OR2G3Q8NGZ4 309 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 C9orf170A2RU37 121 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 LMX1BO60663 402 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 MUC1P15941 1255 aaPredicted RBP13.6□□□□□ -0.23
VARS2-201ENST00000321897 RPL23AP62750 156 aaKnown RBP13.6□□□□□ -0.23
VARS2-201ENST00000321897 FAM189A2Q15884 450 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 LTC4SQ16873 150 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 PBOV1Q9GZY1 135 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 GDF2Q9UK05 429 aaPredicted RBP13.6□□□□□ -0.23
VARS2-201ENST00000321897 RAB22AQ9UL26 194 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 FRG2CA6NGY1 282 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 A8MXK9 166 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 PIN1P1O15428 100 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 MT-ATP6P00846 226 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 FOXK1P85037 733 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 INTS12Q96CB8 462 aaKnown RBP13.6□□□□□ -0.23
VARS2-201ENST00000321897 TMPRSS13Q9BYE2 586 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 MAGT1Q9H0U3 335 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 C12orf49Q9H741 205 aa13.6□□□□□ -0.23
VARS2-201ENST00000321897 PATE3B3GLJ2 98 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 GDF9O60383 454 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 B4GALT1P15291 398 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 MISPQ8IVT2 679 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 C1orf123Q9NWV4 160 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 DIDO1Q9BTC0 2240 aaKnown RBP13.59□□□□□ -0.23
VARS2-201ENST00000321897 SYNGR4O95473 234 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 SMIM6P0DI80 62 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 MDKP21741 143 aaPredicted RBP13.59□□□□□ -0.23
VARS2-201ENST00000321897 POLR2GP62487 172 aaKnown RBP eCLIP13.59□□□□□ -0.23
VARS2-201ENST00000321897 ADIRFQ15847 76 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 ATG4DQ86TL0 474 aaPredicted RBP13.59□□□□□ -0.23
VARS2-201ENST00000321897 ZNF383Q8NA42 475 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 CXCL13O43927 109 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 MT-ND4LP03901 98 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 OPN5Q6U736 354 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 OR1J1Q8NGS3 322 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 ZNF587BE7ETH6 402 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 OGG1O15527 345 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 PHF1O43189 567 aaPredicted RBP13.59□□□□□ -0.23
VARS2-201ENST00000321897 SPRY1O43609 319 aaPredicted RBP13.59□□□□□ -0.23
VARS2-201ENST00000321897 CELA2AP08217 269 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 ZNF141Q15928 474 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 C9orf40Q8IXQ3 194 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 OR5AP2Q8NGF4 316 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 CCDC74BQ96LY2 380 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 KLHDC3Q9BQ90 382 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 TMPRSS5Q9H3S3 457 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 RALGAPA1Q6GYQ0 2036 aa13.59□□□□□ -0.23
VARS2-201ENST00000321897 GLRA1P23415 457 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 ADAD2Q8NCV1 583 aaKnown RBP13.58□□□□□ -0.24
VARS2-201ENST00000321897 OR51F2Q8NH61 342 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 TM4SF19Q96DZ7 209 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 SYT3Q9BQG1 590 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 MTCL1Q9Y4B5 1905 aaKnown RBP13.58□□□□□ -0.24
VARS2-201ENST00000321897 BTBD17A6NE02 478 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 MBTPS2O43462 519 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 TNFSF14O43557 240 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 PNLIPP16233 465 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 PNLIPRP2P54317 469 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 ZNF813Q6ZN06 617 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 MRPL21Q7Z2W9 205 aaKnown RBP13.58□□□□□ -0.24
VARS2-201ENST00000321897 LILRB2Q8N423 598 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 THOC3Q96J01 351 aaKnown RBP13.58□□□□□ -0.24
VARS2-201ENST00000321897 NMNAT2Q9BZQ4 307 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 OR10A2Q9H208 303 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 ZFHX2Q9C0A1 2572 aaPredicted RBP13.58□□□□□ -0.24
VARS2-201ENST00000321897 FER1L5A0AVI2 2057 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 A0A1W2PP11 408 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 OR4C45A6NMZ5 311 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 AP4M1O00189 453 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 CTDSPLO15194 276 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 SSR4P51571 173 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 HMGN3Q15651 99 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 LCN15Q6UWW0 184 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 CCNL2Q96S94 520 aaPredicted RBP13.58□□□□□ -0.24
VARS2-201ENST00000321897 GNG13Q9P2W3 67 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 ABCA1O95477 2261 aa13.58□□□□□ -0.24
VARS2-201ENST00000321897 HEATR5AQ86XA9 2040 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 TNFSF11O14788 317 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 GPR37O15354 613 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 EFSO43281 561 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 JTBO76095 146 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms