RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 SPTBN5Q9NRC6 3674 aaKnown RBP8.53□□□□□ -1.04
PTPRA-202ENST00000318266 IGKV1D-8A0A087WSZ0 117 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 A6NCN8 305 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 TMEM14DPA8MWL7 114 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 PLRG1O43660 514 aaKnown RBP8.53□□□□□ -1.04
PTPRA-202ENST00000318266 NDUFB7P17568 137 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 HOXA5P20719 270 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 THBS4P35443 961 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 RSU1Q15404 277 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 SURF2Q15527 256 aaPredicted RBP8.53□□□□□ -1.04
PTPRA-202ENST00000318266 PCK2Q16822 640 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 CHRFAM7AQ494W8 412 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 GGNBP1Q5YKI7 109 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 SUMF2Q8NBJ7 301 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 UBAC2Q8NBM4 344 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 SPPL3Q8TCT6 385 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 SLC39A7Q92504 469 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 TSLPQ969D9 159 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 SLAMF6Q96DU3 332 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 BMFQ96LC9 184 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 HDHD3Q9BSH5 251 aaPredicted RBP8.53□□□□□ -1.04
PTPRA-202ENST00000318266 ADAM19Q9H013 955 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 SLC35B3Q9H1N7 401 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 GFOD1Q9NXC2 390 aa8.53□□□□□ -1.04
PTPRA-202ENST00000318266 CDRT15L2A8MXV6 281 aa8.52□□□□□ -1.04
PTPRA-202ENST00000318266 NPIPA5E9PKD4 350 aa8.52□□□□□ -1.04
PTPRA-202ENST00000318266 MASP2O00187 686 aa8.52□□□□□ -1.04
PTPRA-202ENST00000318266 APODP05090 189 aa8.52□□□□□ -1.04
PTPRA-202ENST00000318266 ISG15P05161 165 aa8.52□□□□□ -1.04
PTPRA-202ENST00000318266 CRABP1P29762 137 aa8.52□□□□□ -1.04
PTPRA-202ENST00000318266 NHLH2Q02577 135 aa8.52□□□□□ -1.04
PTPRA-202ENST00000318266 IL15RAQ13261 267 aa8.52□□□□□ -1.04
PTPRA-202ENST00000318266 PRTGQ2VWP7 1150 aa8.52□□□□□ -1.04
PTPRA-202ENST00000318266 VAX1Q5SQQ9 334 aa8.52□□□□□ -1.04
PTPRA-202ENST00000318266 PEG10Q86TG7 708 aaKnown RBP8.52□□□□□ -1.04
PTPRA-202ENST00000318266 SMOC1Q9H4F8 434 aa8.52□□□□□ -1.04
PTPRA-202ENST00000318266 VSX1Q9NZR4 365 aaPredicted RBP8.52□□□□□ -1.04
PTPRA-202ENST00000318266 PRODH2Q9UF12 536 aa8.52□□□□□ -1.04
PTPRA-202ENST00000318266 ZDHHC8Q9ULC8 765 aa8.52□□□□□ -1.04
PTPRA-202ENST00000318266 NPIPA1Q9UND3 350 aa8.52□□□□□ -1.04
PTPRA-202ENST00000318266 POMT1Q9Y6A1 747 aa8.52□□□□□ -1.04
PTPRA-202ENST00000318266 A8MVM7 634 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 H0YL77 283 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 PLPP3O14495 311 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 DEDDO75618 318 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 AHSA1O95433 338 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 CLPSP04118 112 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 CXCL1P09341 107 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 HNRNPA1P09651 372 aaKnown RBP eCLIP8.52□□□□□ -1.05
PTPRA-202ENST00000318266 JMJD7P0C870 316 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 BLVRBP30043 206 aaPredicted RBP8.52□□□□□ -1.05
PTPRA-202ENST00000318266 CDX1P47902 265 aaPredicted RBP8.52□□□□□ -1.05
PTPRA-202ENST00000318266 SLC35A1P78382 337 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 CCL20P78556 96 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 HAGHQ16775 308 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 RSPO4Q2I0M5 234 aaPredicted RBP8.52□□□□□ -1.05
PTPRA-202ENST00000318266 OPN5Q6U736 354 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 HEPN1Q6WQI6 88 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 ZNF574Q6ZN55 896 aaPredicted RBP8.52□□□□□ -1.05
PTPRA-202ENST00000318266 NAXEQ8NCW5 288 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 ZNF248Q8NDW4 579 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 DAZLQ92904 295 aaKnown RBP8.52□□□□□ -1.05
PTPRA-202ENST00000318266 ABHD14AQ9BUJ0 271 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 SCRT1Q9BWW7 348 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 CHST5Q9GZS9 411 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 TUBA4BQ9H853 241 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 FAM206AQ9NX38 181 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 HDGFL3Q9Y3E1 203 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 TGIF2-C20orf24A0A0A6YYL0 155 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 CCDC163A0A0D9SF12 145 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 ZNF726A6NNF4 738 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 IL33O95760 270 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 FABP4P15090 132 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 OMGP23515 440 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 CDAP32320 146 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 TAGLN2P37802 199 aaKnown RBP8.52□□□□□ -1.05
PTPRA-202ENST00000318266 FOXL2P58012 376 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 SLC26A5P58743 744 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 FOXK1P85037 733 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 RHEBQ15382 184 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 Q3ZCU0 254 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 C1QL2Q7Z5L3 287 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 SULF2Q8IWU5 870 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 OR14K1Q8NGZ2 314 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 SCARF2Q96GP6 870 aaPredicted RBP8.52□□□□□ -1.05
PTPRA-202ENST00000318266 C5orf34Q96MH7 638 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 ZNF2Q9BSG1 426 aaPredicted RBP8.52□□□□□ -1.05
PTPRA-202ENST00000318266 PLA2G2FQ9BZM2 168 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 NELFAQ9H3P2 528 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 PRDM13Q9H4Q3 707 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 C1orf123Q9NWV4 160 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 OSGIN2Q9Y236 505 aa8.52□□□□□ -1.05
PTPRA-202ENST00000318266 SHISA8B8ZZ34 492 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 H3BML4 177 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 CYB5BO43169 146 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 IFNA21P01568 189 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 QDPRP09417 244 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 DANCRP0C864 163 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 GIMD1P0DJR0 217 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 MYOGP15173 224 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms