RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 GALP22466 123 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 MTCP1P56278 107 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 DAZAP2Q15038 168 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 PRAMEF6Q5VXH4 476 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 USP43Q70EL4 1123 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 C1orf174Q8IYL3 243 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 FBXL14Q8N1E6 418 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 ACBD4Q8NC06 268 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 BORCS8Q96FH0 119 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 PSMG3-AS1Q96PY0 264 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 PLGRKTQ9HBL7 147 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 TMEM138Q9NPI0 162 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 HECTD1Q9ULT8 2610 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 DHRS7CA6NNS2 312 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 HS3ST1O14792 307 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 CALCBP10092 127 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 ATF1P18846 271 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 FSTP19883 344 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 ZNF93P35789 620 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 HAAOP46952 286 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 OR3A4PP47883 348 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 TLE4Q04727 773 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 CNN3Q15417 329 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 MST1LQ2TV78 715 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 TMEM42Q69YG0 159 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 ZNF787Q6DD87 383 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 Q6ZSR3 168 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 GAL3ST1Q99999 423 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 LIME1Q9H400 295 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 FOXJ3Q9UPW0 622 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 SLC7A11Q9UPY5 501 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 MAP1AP78559 2803 aaPredicted RBP13.1□□□□□ -0.31
PDLIM5-202ENST00000318007 LOC100289279A0A1B0GTE1 492 aa13.1□□□□□ -0.31
PDLIM5-202ENST00000318007 VSTM5A8MXK1 200 aa13.1□□□□□ -0.31
PDLIM5-202ENST00000318007 ANGPTL7O43827 346 aa13.1□□□□□ -0.31
PDLIM5-202ENST00000318007 CST4P01036 141 aa13.1□□□□□ -0.31
PDLIM5-202ENST00000318007 CDKN1AP38936 164 aa13.1□□□□□ -0.31
PDLIM5-202ENST00000318007 MTNR1BP49286 362 aa13.1□□□□□ -0.31
PDLIM5-202ENST00000318007 KISS1Q15726 138 aa13.1□□□□□ -0.31
PDLIM5-202ENST00000318007 CEACAM21Q3KPI0 293 aa13.1□□□□□ -0.31
PDLIM5-202ENST00000318007 IDNKQ5T6J7 187 aa13.1□□□□□ -0.31
PDLIM5-202ENST00000318007 WDR86Q86TI4 376 aa13.1□□□□□ -0.31
PDLIM5-202ENST00000318007 CALHM1Q8IU99 346 aa13.1□□□□□ -0.31
PDLIM5-202ENST00000318007 OR5P3Q8WZ94 311 aa13.1□□□□□ -0.31
PDLIM5-202ENST00000318007 THRSPQ92748 146 aa13.1□□□□□ -0.31
PDLIM5-202ENST00000318007 BARHL1Q9BZE3 327 aa13.1□□□□□ -0.31
PDLIM5-202ENST00000318007 ELL3Q9HB65 397 aaPredicted RBP13.1□□□□□ -0.31
PDLIM5-202ENST00000318007 NEK6Q9HC98 313 aa13.1□□□□□ -0.31
PDLIM5-202ENST00000318007 LY6HO94772 140 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 TUBG1P23258 451 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 MAB21L1Q13394 359 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 P2RY14Q15391 338 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 MPPED2Q15777 294 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 CNPY1Q3B7I2 92 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 SFXN4Q6P4A7 337 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 OR4D6Q8NGJ1 314 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 OR13G1Q8NGZ3 307 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 C10orf35Q96D05 121 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 OR2V2Q96R30 315 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 CNTD2Q9H8S5 307 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 TUBG2Q9NRH3 451 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 NDUFA13Q9P0J0 144 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 PTPN13Q12923 2485 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 ABCA12Q86UK0 2595 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 TRAV1-2A0A0B4J238 106 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 A6NLC8 198 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 IGHV1-46P01743 117 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 RBP2P50120 134 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 SNRPD2P62316 118 aaKnown RBP13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 MADCAM1Q13477 382 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 HAGHLQ6PII5 290 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 ZNF826PQ6ZT77 177 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 UTS2BQ765I0 119 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 TGIF2LYQ8IUE0 185 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 ZNF295-AS1Q8N0V1 137 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 OR10K1Q8NGX5 313 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 PHYHIPQ92561 330 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 FAM46BQ96A09 425 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 MPC1Q9Y5U8 109 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 V9GY05 133 aa13.09□□□□□ -0.31
PDLIM5-202ENST00000318007 POLQO75417 2590 aa13.08□□□□□ -0.32
PDLIM5-202ENST00000318007 A0A0G2JK05 382 aa13.08□□□□□ -0.32
PDLIM5-202ENST00000318007 B9A039 149 aa13.08□□□□□ -0.32
PDLIM5-202ENST00000318007 HAX1O00165 279 aa13.08□□□□□ -0.32
PDLIM5-202ENST00000318007 CDIPTO14735 213 aa13.08□□□□□ -0.32
PDLIM5-202ENST00000318007 CDC14BO60729 498 aa13.08□□□□□ -0.32
PDLIM5-202ENST00000318007 PAHP00439 452 aa13.08□□□□□ -0.32
PDLIM5-202ENST00000318007 ZNF529Q6P280 563 aa13.08□□□□□ -0.32
PDLIM5-202ENST00000318007 CCDC54Q8NEL0 328 aa13.08□□□□□ -0.32
PDLIM5-202ENST00000318007 SLC25A46Q96AG3 418 aa13.08□□□□□ -0.32
PDLIM5-202ENST00000318007 ZNF488Q96MN9 340 aa13.08□□□□□ -0.32
PDLIM5-202ENST00000318007 hCG_1807616A0A1W2PRN6 198 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 RHBDL1O75783 438 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 IL1AP01583 271 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 CD8AP01732 235 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 FUT6P51993 359 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 SNU13P55769 128 aaKnown RBP13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 TNFAIP6P98066 277 aaPredicted RBP13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 ZNF154Q13106 437 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 ZBTB37Q5TC79 503 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms