RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PYY3Q5JQD4 70 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 DCAF10Q5QP82 559 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 ATP1A1-AS1Q5TC04 95 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 OR52W1Q6IF63 320 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 UEVLDQ8IX04 471 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 PRSS35Q8N3Z0 413 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 BOLLQ8N9W6 283 aaKnown RBP11.5□□□□□ -0.57
CPNE1-201ENST00000317677 ZNF383Q8NA42 475 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 SLC25A38Q96DW6 304 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 S100A16Q96FQ6 103 aaKnown RBP11.5□□□□□ -0.57
CPNE1-201ENST00000317677 SIGLEC12Q96PQ1 595 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 CLCC1Q96S66 551 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 CHMP1AQ9HD42 196 aaPredicted RBP11.5□□□□□ -0.57
CPNE1-201ENST00000317677 PARPBPQ9NWS1 579 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 IKZF2Q9UKS7 526 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 LHX6Q9UPM6 363 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 TIMM10BQ9Y5J6 103 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 PKD1L2Q7Z442 2459 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 IGHV3-15A0A0B4J1V0 119 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 OR4C45A6NMZ5 311 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 SULT2B1O00204 365 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 TCAPO15273 167 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 CD74P04233 296 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 CD2P06729 351 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 ANXA2P07355 339 aaKnown RBP11.5□□□□□ -0.57
CPNE1-201ENST00000317677 PGA4P0DJD7 388 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 PGA3P0DJD8 388 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 DCTDP32321 178 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 GLP1RP43220 463 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 CDX1P47902 265 aaPredicted RBP11.5□□□□□ -0.57
CPNE1-201ENST00000317677 CYB561P49447 251 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 CAV2P51636 162 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 PKIAP61925 76 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 ADAM8P78325 824 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 FOXO1Q12778 655 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 MFAP5Q13361 173 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 SPINK14Q6IE38 97 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 C11orf88Q6PI97 169 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 YRDCQ86U90 279 aaKnown RBP11.5□□□□□ -0.57
CPNE1-201ENST00000317677 DTX1Q86Y01 620 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 OR2G2Q8NGZ5 317 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 OR6X1Q8NH79 312 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 OXGR1Q96P68 337 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 UCN2Q96RP3 112 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 GFI1Q99684 422 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 SMAD5Q99717 465 aaKnown RBP11.5□□□□□ -0.57
CPNE1-201ENST00000317677 ABHD6Q9BV23 337 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 HES7Q9BYE0 225 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 DKK4Q9UBT3 224 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 FOXJ3Q9UPW0 622 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 CDRT15L2A8MXV6 281 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 GPRIN2O60269 458 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 PNPP00491 289 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 IFNA2P01563 188 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 ZNF17P17021 662 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 HLA-GP17693 338 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 RAB5AP20339 215 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 SRD5A2P31213 254 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 SLC35A1P78382 337 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 SRSF6Q13247 344 aaKnown RBP11.49□□□□□ -0.57
CPNE1-201ENST00000317677 SLC17A1Q14916 467 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 PCK2Q16822 640 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 NOXO1Q8NFA2 376 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 OR10AC1Q8NH08 325 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 CCDC107Q8WV48 283 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 SAT2Q96F10 170 aaPredicted RBP11.49□□□□□ -0.57
CPNE1-201ENST00000317677 SRXN1Q9BYN0 137 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 CHST5Q9GZS9 411 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 ELOVL3Q9HB03 270 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 RYDENQ9NUL5 291 aaKnown RBP11.49□□□□□ -0.57
CPNE1-201ENST00000317677 ZNF281Q9Y2X9 895 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 POMT1Q9Y6A1 747 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 TMEM14AQ9Y6G1 99 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 URB1O60287 2271 aaKnown RBP11.49□□□□□ -0.57
CPNE1-201ENST00000317677 FAM208BQ5VWN6 2430 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 CNTRLQ7Z7A1 2325 aa11.49□□□□□ -0.57
CPNE1-201ENST00000317677 LOC102725191A0A1B0GVB3 256 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 MFNGO00587 321 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 TACSTD2P09758 323 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 FKBP2P26885 142 aaKnown RBP11.48□□□□□ -0.57
CPNE1-201ENST00000317677 DDTP30046 118 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 ROM1Q03395 351 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 GLO1Q04760 184 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 EIF2B1Q14232 305 aaKnown RBP11.48□□□□□ -0.57
CPNE1-201ENST00000317677 PNLIPRP3Q17RR3 467 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 OR10K2Q6IF99 312 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 FAM220AQ7Z4H9 259 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 GGNQ86UU5 652 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 LINC00346Q8IVM7 164 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 OR5AP2Q8NGF4 316 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 ST7LQ8TDW4 575 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 PPP1R14AQ96A00 147 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 MEGF10Q96KG7 1140 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 C4orf45Q96LM5 186 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 NOX4Q9NPH5 578 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 LRFN1Q9P244 771 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 TRBV5-5A0A0J9YX44 114 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 H7C417 338 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 TNFSF11O14788 317 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 SRSF10O75494 262 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms