RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ZNF649Q9BS31 505 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 MND1Q9BWT6 205 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 GSX1Q9H4S2 264 aaPredicted RBP9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 PPP1R3EQ9H7J1 279 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CLEC2DQ9UHP7 191 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 PPIAL4AQ9Y536 164 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ABCA1O95477 2261 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 FLNAP21333 2647 aaKnown RBP9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 MALRD1Q5VYJ5 2156 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 A6NIN4 97 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OR4C45A6NMZ5 311 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ZNF205O95201 554 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 IGHV2-5P01817 119 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 IL2RGP31785 369 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CD80P33681 288 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 THBS2P35442 1172 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 HNRNPA0Q13151 305 aaKnown RBP9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CDK5R1Q15078 307 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 RBM48Q5RL73 367 aaKnown RBP9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 FAM166AQ6J272 317 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ZNF826PQ6ZT77 177 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 Q71RC1 249 aaPredicted RBP9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 KRT74Q7RTS7 529 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 WDR86Q86TI4 376 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 LINC01356Q8N9X3 169 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 LRRC29Q8WV35 223 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 GATAD2BQ8WXI9 593 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 SMIM19Q96E16 107 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 PDCD1LG2Q9BQ51 273 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CHST5Q9GZS9 411 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CCDC90BQ9GZT6 254 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 RASSF4Q9H2L5 321 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 NEK6Q9HC98 313 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 YAE1D1Q9NRH1 226 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 FKBP14Q9NWM8 211 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 BABAM2Q9NXR7 383 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ERVK-18Q9QC07 812 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 KCNS2Q9ULS6 477 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 DHDHQ9UQ10 334 aa9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.25□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 TRAV38-1A0A0B4J264 116 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OOEPA6NGQ2 149 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 B4DSR2 109 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 E9PI62 339 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CDIPTO14735 213 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 WNT9BO14905 357 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 RGS10O43665 173 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 LMX1BO60663 402 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ZFPL1O95159 310 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CD2P06729 351 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 RPS2P15880 293 aaKnown RBP9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 EEF1B2P24534 225 aaKnown RBP9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 C21orf33P30042 268 aaPredicted RBP9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 PMELP40967 661 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 GTF2A1P52655 376 aaPredicted RBP9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ZMYND11Q15326 602 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 TMEM42Q69YG0 159 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 HAGHLQ6PII5 290 aaPredicted RBP9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 WDR82Q6UXN9 313 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 NLRC3Q7RTR2 1065 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 GLCCI1Q86VQ1 547 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 LRRC28Q86X40 367 aaPredicted RBP9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ZNF573Q86YE8 665 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OR8B3Q8NGG8 313 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OR10Z1Q8NGY1 313 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OR51F2Q8NH61 342 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 TRMT10AQ8TBZ6 339 aaKnown RBP9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 NPRL2Q8WTW4 380 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 RPL3LQ92901 407 aaKnown RBP9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 RNF166Q96A37 237 aaPredicted RBP9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 FGGYQ96C11 551 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 BORCS8Q96FH0 119 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OR8B2Q96RD0 313 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 TLNRD1Q9H1K6 362 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 PATZ1Q9HBE1 687 aaKnown RBP9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 DNAJB11Q9UBS4 358 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 MIOXQ9UGB7 285 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 POLDIP2Q9Y2S7 368 aa9.24□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ABCA2Q9BZC7 2435 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 PNMA8CA0A1B0GUJ8 204 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 FAM230AA0A1W2PPH8 454 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CEACAM18A8MTB9 384 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 C3orf80F5H4A9 247 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 LGALS8O00214 317 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 FSTL3O95633 263 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 TGFAP01135 160 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 MSMBP08118 114 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 PCMT1P22061 227 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 RBMXP38159 391 aaKnown RBP9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 HAAOP46952 286 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 SLC35A2P78381 396 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 MICBQ29980 383 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ZNF404Q494X3 552 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ESCO2Q56NI9 601 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 DMRTC1Q5HYR2 192 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 FAM201AQ5SY85 155 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 SFRP4Q6FHJ7 346 aaPredicted RBP9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 DCDC5Q6ZRR9 648 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 UTS2BQ765I0 119 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 GCSAMQ8N6F7 178 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms