RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 PRSS37A4D1T9 235 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 ASPDHA6ND91 283 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 AKR7A3O95154 331 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 NXPH3O95157 252 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 ETHE1O95571 254 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 RPA2P15927 270 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 ATF1P18846 271 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 PPICP45877 212 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 GABRA4P48169 554 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 RAB13P51153 203 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 SCAND1P57086 179 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 TAS2R45P59539 299 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 UBE2G1P62253 170 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 FABP9Q0Z7S8 132 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 RAB35Q15286 201 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 GUK1Q16774 197 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 ST3GAL2Q16842 350 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 MOGAT2Q3SYC2 334 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 THEM4Q5T1C6 240 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 RNF165Q6ZSG1 346 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 LRRTM1Q86UE6 522 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 THNSL2Q86YJ6 484 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 HGDQ93099 445 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 AKR1E2Q96JD6 320 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 ST6GAL2Q96JF0 529 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 CIB3Q96Q77 187 aaPredicted RBP10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 SUCNR1Q9BXA5 334 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 HMSDA8MTL9 139 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 NTN3O00634 580 aaPredicted RBP10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 TIMM8AO60220 97 aaPredicted RBP10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 SSSCA1O60232 199 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 FGF17O60258 216 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 NAT1P18440 290 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 UBE2G2P60604 165 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 TOMM34Q15785 309 aaPredicted RBP10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 PRAMEF5Q5TYX0 476 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 PRAMEF6Q5VXH4 476 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 OR5B3Q8NH48 314 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 MUCL1Q96DR8 90 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 DDA1Q9BW61 102 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 CTDSP1Q9GZU7 261 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 TXNIPQ9H3M7 391 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 GPR84Q9NQS5 396 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 SLC22A13Q9Y226 551 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 ARID1AO14497 2285 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 SERPINE3A8MV23 424 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 MMP7P09237 267 aaPredicted RBP10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 PCMT1P22061 227 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 CHRNB4P30926 498 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 SSX1Q16384 188 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 PRTGQ2VWP7 1150 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 GPR173Q9NS66 373 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 DHCR7Q9UBM7 475 aaKnown RBP10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 RAB27BO00194 218 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 UPK1AO00322 258 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 TM4SF5O14894 197 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 NECAP1Q8NC96 275 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 SOX7Q9BT81 388 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 MTFP1Q9UDX5 166 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 FOXJ3Q9UPW0 622 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 FAM96BQ9Y3D0 163 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 CD46P15529 392 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 HMGA2P52926 109 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 IQCJQ1A5X6 159 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 ZNF574Q6ZN55 896 aaPredicted RBP10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 SSX7Q7RTT5 188 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 SIRT6Q8N6T7 355 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 BCORP1Q8N888 145 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 OR51F2Q8NH61 342 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 AKR7LQ8NHP1 331 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 ST8SIA1Q92185 356 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 CMBLQ96DG6 245 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 A4GNTQ9UNA3 340 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 ZNF891A8MT65 544 aaPredicted RBP10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 ZNF749O43361 778 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 PLPP2O43688 288 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 TOX4O94842 621 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 RRASP10301 218 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 MEOX2P50222 304 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 DVL1P1P54792 670 aaPredicted RBP10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 CDK5Q00535 292 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 GTF2H5Q6ZYL4 71 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 ARHGDIGQ99819 225 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 EMC6Q9BV81 110 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 RIMS4Q9H426 269 aaPredicted RBP10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 ZDHHC11Q9H8X9 412 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 LIN7CQ9NUP9 197 aaKnown RBP10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 CACFD1Q9UGQ2 172 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 H0Y8G0 127 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 M0R135 149 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 PRSS23O95084 383 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 OPRM1P35372 400 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 PIGPP57054 158 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 GSG1Q2KHT4 349 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 UNQ6494/PRO21346Q6UXR6 183 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 LHFPL2Q6ZUX7 228 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 MSRB3Q8IXL7 192 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 OR4D10Q8NGI6 311 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 ZNF799Q96GE5 643 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 CHRDL1Q9BU40 450 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms