RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 NCKAP5O14513 1909 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 A0A1W2PNV4 684 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 P2RY10O00398 339 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 SLC6A9P48067 706 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 ZSCAN4Q8NAM6 433 aaPredicted RBP16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 GLYATL2Q8WU03 294 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 ZPBPQ9BS86 351 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 DKKL1Q9UK85 242 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 IGHEP01854 428 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 VSIG8P0DPA2 414 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 LYL1P12980 280 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 ABOP16442 354 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 CDAP32320 146 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 EIF1P41567 113 aaKnown RBP16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 MMP16P51512 607 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 ACER2Q5QJU3 275 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 AVPI1Q5T686 147 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 SKA3Q8IX90 412 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 OR10R2Q8NGX6 335 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 LILRB1Q8NHL6 650 aaPredicted RBP16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 MARCH1Q8TCQ1 289 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 FGGYQ96C11 551 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 RRNAD1Q96FB5 475 aaKnown RBP16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 UCN2Q96RP3 112 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 USB1Q9BQ65 265 aaKnown RBP16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 MRPL13Q9BYD1 178 aaKnown RBP16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 LPAR3Q9UBY5 353 aa16.1■□□□□ 0.17
PDLIM3-201ENST00000284767 ZFHX4Q86UP3 3567 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 IFNA4P05014 189 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 RFPL3SP0C7P2 107 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 GNB3P16520 340 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 NPBWR1P48145 328 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 MST1LQ2TV78 715 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 YRDCQ86U90 279 aaKnown RBP16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 OR52N4Q8NGI2 321 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 OR4K15Q8NH41 348 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 PSMF1Q92530 271 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 SAT2Q96F10 170 aaPredicted RBP16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 RAB18Q9NP72 206 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 LOC101059948A0A1B0GTJ6 334 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 SSX5O60225 188 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 PMP2P02689 132 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 ADH6P28332 368 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 DSCR4P56555 118 aaPredicted RBP16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 SGCAQ16586 387 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 PRSS54Q6PEW0 395 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 TMPPEQ6ZT21 453 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 TERB2Q8NHR7 220 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 C11orf40Q8WZ69 217 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 WNT2BQ93097 391 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 FANCFQ9NPI8 374 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 DEPPQ9NTK1 212 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 SLC5A6Q9Y289 635 aa16.09■□□□□ 0.17
PDLIM3-201ENST00000284767 KMT2EQ8IZD2 1858 aa16.08■□□□□ 0.17
PDLIM3-201ENST00000284767 ZNF705EA8MWA4 302 aaPredicted RBP16.08■□□□□ 0.17
PDLIM3-201ENST00000284767 APOC1P02654 83 aa16.08■□□□□ 0.17
PDLIM3-201ENST00000284767 H2BFMP0C1H6 154 aa16.08■□□□□ 0.17
PDLIM3-201ENST00000284767 ACTBL2Q562R1 376 aa16.08■□□□□ 0.17
PDLIM3-201ENST00000284767 NTNG2Q96CW9 530 aa16.08■□□□□ 0.17
PDLIM3-201ENST00000284767 THOC3Q96J01 351 aaKnown RBP16.08■□□□□ 0.17
PDLIM3-201ENST00000284767 CENPMQ9NSP4 180 aa16.08■□□□□ 0.17
PDLIM3-201ENST00000284767 IL17BQ9UHF5 180 aa16.08■□□□□ 0.17
PDLIM3-201ENST00000284767 ANAPC10Q9UM13 185 aa16.08■□□□□ 0.17
PDLIM3-201ENST00000284767 MED13Q9UHV7 2174 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 ZNF318Q5VUA4 2279 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 CCDC187A0A096LP49 1063 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 CEACAM18A8MTB9 384 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 H0YIZ8 118 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 CHRM2P08172 466 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 PGA4P0DJD7 388 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 PGA3P0DJD8 388 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 ZNF43P17038 809 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 GNALP38405 381 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 MEOX2P50222 304 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 CLRN1P58418 232 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 VAX1Q5SQQ9 334 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 ARRDC1Q8N5I2 433 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 SUMF1Q8NBK3 374 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 SLC25A43Q8WUT9 341 aaPredicted RBP16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 RNF133Q8WVZ7 376 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 AQP10Q96PS8 301 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 NRIP2Q9BQI9 281 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 SEC61A2Q9H9S3 476 aa16.08■□□□□ 0.16
PDLIM3-201ENST00000284767 NPIPB13A6NJU9 1138 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 TMEM14DPA8MWL7 114 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 NPIPB4C9JG80 1138 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 GALR2O43603 387 aaPredicted RBP16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 TNFSF15O95150 251 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 SFT2D2O95562 160 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 CHAF1BQ13112 559 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 SPINK14Q6IE38 97 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 ADAMTS17Q8TE56 1095 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 ZNF775Q96BV0 537 aaPredicted RBP16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 ACKR4Q9NPB9 350 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 FAM206AQ9NX38 181 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 RCC2Q9P258 522 aaKnown RBP16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 GPR132Q9UNW8 380 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 HDGFL3Q9Y3E1 203 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 CFAP47Q6ZTR5 3102 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms