RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 SPRY4Q9C004 299 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 FAM117AQ9C073 453 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 FN3KRPQ9HA64 309 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 PNRC2Q9NPJ4 139 aaKnown RBP11.36□□□□□ -0.59
C9orf3-201ENST00000277198 GPR84Q9NQS5 396 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 LOC100509620A0A075B734 347 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 C5orf51A6NDU8 294 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 STMND1H3BQB6 276 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 MFNGO00587 321 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 ABCD4O14678 606 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 CA11O75493 328 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 MPIG6BO95866 241 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 PMP2P02689 132 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 PRF1P14222 555 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 ZNF17P17021 662 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 ZNF43P17038 809 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 SERPINF1P36955 418 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 TAS2R46P59540 309 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 ECH1Q13011 328 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 SURF2Q15527 256 aaPredicted RBP11.36□□□□□ -0.59
C9orf3-201ENST00000277198 MICBQ29980 383 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 PLEKHN1Q494U1 663 aaPredicted RBP11.36□□□□□ -0.59
C9orf3-201ENST00000277198 PLAC9Q5JTB6 97 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 FAM74A1Q5RGS3 127 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 TMEM164Q5U3C3 297 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 KCTD9Q7L273 389 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 OR2M3Q8NG83 312 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 MARCH1Q8TCQ1 289 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 RELTQ969Z4 430 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 C10orf35Q96D05 121 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 SLC26A1Q9H2B4 701 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 TMEM100Q9NV29 134 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 ASH2LQ9UBL3 628 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 A0A0A6YYD4 124 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 AQP7P3A6NL99 342 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 ZNF726A6NNF4 738 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 EEF1E1-BLOC1S5C9J1V9 151 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 IGLV3-1P01715 115 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 ABOP16442 354 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 TMEM50BP56557 158 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 TMPRSS3P57727 454 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 SLC35A1P78382 337 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 ELP2Q6IA86 826 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 LHFPL1Q86WI0 220 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 COMMD2Q86X83 199 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 BAP18Q8IXM2 172 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 FADS6Q8N9I5 356 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 SLC38A9Q8NBW4 561 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 TMEM104Q8NE00 496 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 OR5H2Q8NGV7 314 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 RNF141Q8WVD5 230 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 LRRC46Q96FV0 321 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 NICN1Q9BSH3 213 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 MS4A7Q9GZW8 240 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-201ENST00000277198 C5orf66Q9H5L9 145 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 CFAP46Q8IYW2 2715 aa11.35□□□□□ -0.59
C9orf3-201ENST00000277198 A0A087WZY1 265 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 K7ENP7 123 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 SOCS1O15524 211 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 SCRG1O75711 98 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 TSPAN9O75954 239 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 HCKP08631 526 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 PET100P0DJ07 73 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 ECI1P42126 302 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 STK11Q15831 433 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 INO80CQ6PI98 192 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-201ENST00000277198 DRAM2Q6UX65 266 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 Q6ZSR3 168 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 GTPBP8Q8N3Z3 284 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-201ENST00000277198 BPIFCQ8NFQ6 507 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 OR14K1Q8NGZ2 314 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 SPACA9Q96E40 222 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-201ENST00000277198 OR5B2Q96R09 309 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 RNF126Q9BV68 326 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 OR10A2Q9H208 303 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 AKIRIN1Q9H9L7 192 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-201ENST00000277198 RARRES3Q9UL19 164 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 PCDHB10Q9UN67 800 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 CSAG2Q9Y5P2 127 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 PCNX3Q9H6A9 2034 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 A0A0U1RQV5 110 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 FIGNL2A6NMB9 653 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 SERPINE3A8MV23 424 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 SHISA8B8ZZ34 492 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 DNASE2O00115 360 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-201ENST00000277198 APOC1P02654 83 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 PRB1P04280 392 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 QDPRP09417 244 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 NAT2P11245 290 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 LIFP15018 202 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 PGAM2P15259 253 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 THBS4P35443 961 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 GUCA1AP43080 201 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-201ENST00000277198 OR3A4PP47883 348 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 ZNF133P52736 654 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-201ENST00000277198 MFAP5Q13361 173 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 ZNF169Q14929 603 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-201ENST00000277198 ATXN7L3Q14CW9 347 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-201ENST00000277198 SGCAQ16586 387 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 FAM69BQ5VUD6 431 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms