RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 KLHL13Q9P2N7 655 aa24.18■■□□□ 1.46
CBX4-201ENST00000269397 CST4P01036 141 aa24.18■■□□□ 1.46
CBX4-201ENST00000269397 SNRNP70P08621 437 aaKnown RBP24.18■■□□□ 1.46
CBX4-201ENST00000269397 ZNF806P0C7X5 589 aa24.18■■□□□ 1.46
CBX4-201ENST00000269397 PGA4P0DJD7 388 aa24.18■■□□□ 1.46
CBX4-201ENST00000269397 PGA3P0DJD8 388 aa24.18■■□□□ 1.46
CBX4-201ENST00000269397 FOSL2P15408 326 aa24.18■■□□□ 1.46
CBX4-201ENST00000269397 EIF5AP63241 154 aaKnown RBP24.18■■□□□ 1.46
CBX4-201ENST00000269397 SHHQ15465 462 aa24.18■■□□□ 1.46
CBX4-201ENST00000269397 HIST1H2BAQ96A08 127 aa24.18■■□□□ 1.46
CBX4-201ENST00000269397 BSCL2Q96G97 398 aaPredicted RBP24.18■■□□□ 1.46
CBX4-201ENST00000269397 KLRF1Q9NZS2 232 aa24.18■■□□□ 1.46
CBX4-201ENST00000269397 C14orf166Q9Y224 244 aaKnown RBP24.18■■□□□ 1.46
CBX4-201ENST00000269397 COL5A1P20908 1838 aaPredicted RBP24.17■■□□□ 1.46
CBX4-201ENST00000269397 A0A1W2PPE3 182 aa24.17■■□□□ 1.46
CBX4-201ENST00000269397 IFNA2P01563 188 aa24.17■■□□□ 1.46
CBX4-201ENST00000269397 ZNF44P15621 663 aa24.17■■□□□ 1.46
CBX4-201ENST00000269397 PTAFRP25105 342 aa24.17■■□□□ 1.46
CBX4-201ENST00000269397 DTX1Q86Y01 620 aa24.17■■□□□ 1.46
CBX4-201ENST00000269397 NOXO1Q8NFA2 376 aa24.17■■□□□ 1.46
CBX4-201ENST00000269397 PECRQ9BY49 303 aa24.17■■□□□ 1.46
CBX4-201ENST00000269397 MEMO1Q9Y316 297 aa24.17■■□□□ 1.46
CBX4-201ENST00000269397 NPIPB13A6NJU9 1138 aa24.17■■□□□ 1.46
CBX4-201ENST00000269397 NPIPB4C9JG80 1138 aa24.17■■□□□ 1.46
CBX4-201ENST00000269397 SGCEO43556 437 aa24.17■■□□□ 1.46
CBX4-201ENST00000269397 NME2P1O60361 137 aa24.17■■□□□ 1.46
CBX4-201ENST00000269397 DVL1P1P54792 670 aaPredicted RBP24.17■■□□□ 1.46
CBX4-201ENST00000269397 TAS2R46P59540 309 aa24.17■■□□□ 1.46
CBX4-201ENST00000269397 SMCO1Q147U7 214 aa24.17■■□□□ 1.46
CBX4-201ENST00000269397 C6orf201Q7Z4U5 140 aa24.17■■□□□ 1.46
CBX4-201ENST00000269397 EMG1Q92979 244 aaKnown RBP24.17■■□□□ 1.46
CBX4-201ENST00000269397 ERGIC1Q969X5 290 aa24.17■■□□□ 1.46
CBX4-201ENST00000269397 IP6K3Q96PC2 410 aa24.17■■□□□ 1.46
CBX4-201ENST00000269397 UCK1Q9HA47 277 aa24.17■■□□□ 1.46
CBX4-201ENST00000269397 SPAG17Q6Q759 2223 aa24.16■■□□□ 1.46
CBX4-201ENST00000269397 LINC00587B1AMM8 73 aa24.16■■□□□ 1.46
CBX4-201ENST00000269397 TAAR5O14804 337 aa24.16■■□□□ 1.46
CBX4-201ENST00000269397 IGHG1P01857 330 aa24.16■■□□□ 1.46
CBX4-201ENST00000269397 HGFACQ04756 655 aa24.16■■□□□ 1.46
CBX4-201ENST00000269397 SEMA6DQ8NFY4 1073 aa24.16■■□□□ 1.46
CBX4-201ENST00000269397 OR6S1Q8NH40 331 aa24.16■■□□□ 1.46
CBX4-201ENST00000269397 MRPL24Q96A35 216 aaKnown RBP24.16■■□□□ 1.46
CBX4-201ENST00000269397 ZNF2Q9BSG1 426 aaPredicted RBP24.16■■□□□ 1.46
CBX4-201ENST00000269397 C8orf33Q9H7E9 229 aaPredicted RBP24.16■■□□□ 1.46
CBX4-201ENST00000269397 PNRC2Q9NPJ4 139 aaKnown RBP24.16■■□□□ 1.46
CBX4-201ENST00000269397 AMDHD2Q9Y303 409 aa24.16■■□□□ 1.46
CBX4-201ENST00000269397 ADAMTS9Q9P2N4 1935 aa24.16■■□□□ 1.46
CBX4-201ENST00000269397 MED19A0JLT2 244 aaPredicted RBP24.16■■□□□ 1.46
CBX4-201ENST00000269397 FIGNL2A6NMB9 653 aa24.16■■□□□ 1.46
CBX4-201ENST00000269397 FHITP49789 147 aa24.16■■□□□ 1.46
CBX4-201ENST00000269397 CRIP3Q6Q6R5 217 aa24.16■■□□□ 1.46
CBX4-201ENST00000269397 APCDD1LQ8NCL9 501 aa24.16■■□□□ 1.46
CBX4-201ENST00000269397 MOB1AQ9H8S9 216 aa24.16■■□□□ 1.46
CBX4-201ENST00000269397 PARP11Q9NR21 331 aa24.16■■□□□ 1.46
CBX4-201ENST00000269397 DHRS7CA6NNS2 312 aa24.15■■□□□ 1.46
CBX4-201ENST00000269397 C1orf196B1AJZ1 125 aa24.15■■□□□ 1.46
CBX4-201ENST00000269397 S100A12P80511 92 aa24.15■■□□□ 1.46
CBX4-201ENST00000269397 FNDC9Q8TBE3 224 aa24.15■■□□□ 1.46
CBX4-201ENST00000269397 C1orf123Q9NWV4 160 aa24.15■■□□□ 1.46
CBX4-201ENST00000269397 MCTS1Q9ULC4 181 aaKnown RBP24.15■■□□□ 1.46
CBX4-201ENST00000269397 SHISA7A6NL88 538 aa24.15■■□□□ 1.46
CBX4-201ENST00000269397 S100A6P06703 90 aa24.15■■□□□ 1.46
CBX4-201ENST00000269397 QDPRP09417 244 aa24.15■■□□□ 1.46
CBX4-201ENST00000269397 ECH1Q13011 328 aa24.15■■□□□ 1.46
CBX4-201ENST00000269397 OR5B2Q96R09 309 aa24.15■■□□□ 1.46
CBX4-201ENST00000269397 RNF122Q9H9V4 155 aa24.15■■□□□ 1.46
CBX4-201ENST00000269397 GLI4P10075 376 aa24.14■■□□□ 1.46
CBX4-201ENST00000269397 HOXB1P14653 301 aaPredicted RBP24.14■■□□□ 1.46
CBX4-201ENST00000269397 GABRR1P24046 479 aa24.14■■□□□ 1.46
CBX4-201ENST00000269397 SFTPDP35247 375 aa24.14■■□□□ 1.46
CBX4-201ENST00000269397 ZNF616Q08AN1 781 aa24.14■■□□□ 1.46
CBX4-201ENST00000269397 EIF2S3LQ2VIR3 472 aaKnown RBP24.14■■□□□ 1.46
CBX4-201ENST00000269397 SP6Q3SY56 376 aa24.14■■□□□ 1.46
CBX4-201ENST00000269397 KRBOX4Q5JUW0 171 aa24.14■■□□□ 1.46
CBX4-201ENST00000269397 FAM89BQ8N5H3 189 aa24.14■■□□□ 1.46
CBX4-201ENST00000269397 A0A1B0GX78 115 aa24.14■■□□□ 1.45
CBX4-201ENST00000269397 A6NLC8 198 aa24.14■■□□□ 1.45
CBX4-201ENST00000269397 MIDNQ504T8 468 aa24.14■■□□□ 1.45
CBX4-201ENST00000269397 AWAT1Q58HT5 328 aa24.14■■□□□ 1.45
CBX4-201ENST00000269397 DOK3Q7L591 496 aa24.14■■□□□ 1.45
CBX4-201ENST00000269397 ABCA7Q8IZY2 2146 aa24.14■■□□□ 1.45
CBX4-201ENST00000269397 OR14K1Q8NGZ2 314 aa24.14■■□□□ 1.45
CBX4-201ENST00000269397 PIGTQ969N2 578 aa24.14■■□□□ 1.45
CBX4-201ENST00000269397 MRPL38Q96DV4 380 aaKnown RBP24.14■■□□□ 1.45
CBX4-201ENST00000269397 LYZL4Q96KX0 146 aa24.14■■□□□ 1.45
CBX4-201ENST00000269397 PRRX2Q99811 253 aa24.14■■□□□ 1.45
CBX4-201ENST00000269397 A0A1B0GV50 99 aa24.13■■□□□ 1.45
CBX4-201ENST00000269397 FAHP16930 419 aa24.13■■□□□ 1.45
CBX4-201ENST00000269397 CD38P28907 300 aa24.13■■□□□ 1.45
CBX4-201ENST00000269397 ZNF41P51814 821 aaPredicted RBP24.13■■□□□ 1.45
CBX4-201ENST00000269397 GGNBP1Q5YKI7 109 aa24.13■■□□□ 1.45
CBX4-201ENST00000269397 ZC3HAV1Q7Z2W4 902 aaKnown RBP24.13■■□□□ 1.45
CBX4-201ENST00000269397 SULF2Q8IWU5 870 aa24.13■■□□□ 1.45
CBX4-201ENST00000269397 C15orf54Q8N8G6 183 aa24.13■■□□□ 1.45
CBX4-201ENST00000269397 OR9K2Q8NGE7 335 aa24.13■■□□□ 1.45
CBX4-201ENST00000269397 RHBDD1Q8TEB9 315 aa24.13■■□□□ 1.45
CBX4-201ENST00000269397 PPP4R1LQ9P1A2 415 aa24.13■■□□□ 1.45
CBX4-201ENST00000269397 F5H5K5 113 aa24.13■■□□□ 1.45
CBX4-201ENST00000269397 TRAF3IP2O43734 574 aaPredicted RBP24.13■■□□□ 1.45
CBX4-201ENST00000269397 DEDDO75618 318 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms