RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SPRNQ5BIV9 151 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 C1QL2Q7Z5L3 287 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 LYPD6Q86Y78 171 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 ZDHHC23Q8IYP9 409 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 BATF2Q8N1L9 274 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 ZCCHC24Q8N2G6 241 aaKnown RBP8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 OR4D6Q8NGJ1 314 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 OR5H6Q8NGV6 325 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 OR5P3Q8WZ94 311 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 ITPKCQ96DU7 683 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 RNF170Q96K19 258 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 TMEM204Q9BSN7 226 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 PLK3Q9H4B4 646 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 CNTD2Q9H8S5 307 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 PLGRKTQ9HBL7 147 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 TUBG2Q9NRH3 451 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 TMEM100Q9NV29 134 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 MRPL15Q9P015 296 aaKnown RBP8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 CCDC59Q9P031 241 aaKnown RBP8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 KLF2Q9Y5W3 355 aaPredicted RBP8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 MEGF11A6BM72 1044 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 ZNF732B4DXR9 585 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 MAGEB3O15480 346 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 SPRY1O43609 319 aaPredicted RBP8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 NAT2P11245 290 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 SOX6P35712 828 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 ZNF93P35789 620 aaPredicted RBP8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 SERPINF1P36955 418 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 BMXP51813 675 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 MTCP1P56278 107 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 OR8G1Q15617 311 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 CEACAM21Q3KPI0 293 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 ZNF404Q494X3 552 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 GLT8D1Q68CQ7 371 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 SP5Q6BEB4 398 aaPredicted RBP8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 METAP1DQ6UB28 335 aaPredicted RBP8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 KRT74Q7RTS7 529 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 WDR86Q86TI4 376 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 C1orf174Q8IYL3 243 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 ACBD4Q8NC06 268 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 OR2Z1Q8NG97 314 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 MCFD2Q8NI22 146 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 SLC25A28Q96A46 364 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 BORCS8Q96FH0 119 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 HIST1H2AAQ96QV6 131 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 GPER1Q99527 375 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 ADAT1Q9BUB4 502 aaKnown RBP8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 C6orf62Q9GZU0 229 aaPredicted RBP8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 ZNF442Q9H7R0 627 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 PTTG2Q9NZH5 202 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 COMMD3Q9UBI1 195 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 SLC7A11Q9UPY5 501 aa8.29□□□□□ -1.08
SNRNP40-201ENST00000263694 LOC100289279A0A1B0GTE1 492 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 PQLC2LA1A4F0 135 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 A6NNC1 897 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 RNF223E7ERA6 249 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 AIPO00170 330 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 SLC17A2O00624 439 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 SPRY3O43610 288 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 ANGPTL7O43827 346 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 ALX3O95076 343 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 ALDOBP05062 364 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 ERCC1P07992 297 aaPredicted RBP8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 CD37P11049 281 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 HTR2CP28335 458 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 POU3F4P49335 361 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 RBP2P50120 134 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 FUT6P51993 359 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 MADCAM1Q13477 382 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 DAZAP2Q15038 168 aaPredicted RBP8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 CNN3Q15417 329 aaKnown RBP8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 RAB11BQ15907 218 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 NKPD1Q17RQ9 610 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 MST1LQ2TV78 715 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 C1orf100Q5SVJ3 147 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 LCE2AQ5TA79 106 aaPredicted RBP8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 OR10K2Q6IF99 312 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 FAM166AQ6J272 317 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 CALHM1Q8IU99 346 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 FTMTQ8N4E7 242 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 DTX3Q8N9I9 347 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 OR51D1Q8NGF3 324 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 OR10K1Q8NGX5 313 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 OR8S1Q8NH09 359 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 NXF2Q9GZY0 626 aaKnown RBP8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 METTL17Q9H7H0 456 aaPredicted RBP8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 LIN7BQ9HAP6 207 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 STEAP1Q9UHE8 339 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 MPC1Q9Y5U8 109 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 GCN1Q92616 2671 aaKnown RBP8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 DCHS2Q6V1P9 2916 aa8.28□□□□□ -1.08
SNRNP40-201ENST00000263694 GRPP07492 148 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 CALCBP10092 127 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 PRKACBP22694 351 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 APOBEC3AP31941 199 aaPredicted RBP8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 PEX19P40855 299 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 PSMD7P51665 324 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 ATP1B3P54709 279 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 SELENOVP59797 346 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 HOXA4Q00056 320 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms