RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 HAVCR1Q96D42 359 aa9.86□□□□□ -0.83
PFDN1-201ENST00000261813 TRMT61AQ96FX7 289 aaKnown RBP9.86□□□□□ -0.83
PFDN1-201ENST00000261813 REEP6Q96HR9 211 aa9.86□□□□□ -0.83
PFDN1-201ENST00000261813 SORCS2Q96PQ0 1159 aa9.86□□□□□ -0.83
PFDN1-201ENST00000261813 DERL3Q96Q80 235 aa9.86□□□□□ -0.83
PFDN1-201ENST00000261813 OR14A2Q96R54 314 aa9.86□□□□□ -0.83
PFDN1-201ENST00000261813 VRK1Q99986 396 aaPredicted RBP9.86□□□□□ -0.83
PFDN1-201ENST00000261813 DCSTAMPQ9H295 470 aa9.86□□□□□ -0.83
PFDN1-201ENST00000261813 PLEKHA1Q9HB21 404 aa9.86□□□□□ -0.83
PFDN1-201ENST00000261813 ZNF319Q9P2F9 582 aa9.86□□□□□ -0.83
PFDN1-201ENST00000261813 PURGQ9UJV8 347 aaKnown RBP9.86□□□□□ -0.83
PFDN1-201ENST00000261813 FOXJ3Q9UPW0 622 aa9.86□□□□□ -0.83
PFDN1-201ENST00000261813 MED13LQ71F56 2210 aa9.86□□□□□ -0.83
PFDN1-201ENST00000261813 SPG11Q96JI7 2443 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 TRBV5-7A0A0A0MS05 114 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 A0A1B0GTI1 187 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 FAM229AH3BQW9 127 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 ERCC1P07992 297 aaPredicted RBP9.85□□□□□ -0.83
PFDN1-201ENST00000261813 NAT2P11245 290 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 CD99P14209 185 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 RAC2P15153 192 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 SELEP16581 610 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 ZNF20P17024 532 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 SRMP19623 302 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 KITLGP21583 273 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 CALRP27797 417 aaKnown RBP9.85□□□□□ -0.83
PFDN1-201ENST00000261813 GNALP38405 381 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 RORCP51449 518 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 NCS1P62166 190 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 PPP3R1P63098 170 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 ZNF92Q03936 586 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 RIPPLY1Q0D2K3 151 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 OR2T2Q6IF00 324 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 RDH10Q8IZV5 341 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 PARP16Q8N5Y8 322 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 CSNK2A3Q8NEV1 391 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 SEMA6DQ8NFY4 1073 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 PP6455Q8WZ26 134 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 PPP1R14AQ96A00 147 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 TECTBQ96PL2 329 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 TPK1Q9H3S4 243 aa9.85□□□□□ -0.83
PFDN1-201ENST00000261813 FBXO9Q9UK97 447 aaPredicted RBP9.85□□□□□ -0.83
PFDN1-201ENST00000261813 ZSCAN5BA6NJL1 495 aa9.84□□□□□ -0.83
PFDN1-201ENST00000261813 C17orf100A8MU93 164 aa9.84□□□□□ -0.83
PFDN1-201ENST00000261813 TIMM8AO60220 97 aaPredicted RBP9.84□□□□□ -0.83
PFDN1-201ENST00000261813 LY6HO94772 140 aa9.84□□□□□ -0.83
PFDN1-201ENST00000261813 ALX3O95076 343 aa9.84□□□□□ -0.83
PFDN1-201ENST00000261813 CDRT1O95170 752 aa9.84□□□□□ -0.83
PFDN1-201ENST00000261813 FSTP19883 344 aa9.84□□□□□ -0.83
PFDN1-201ENST00000261813 SOX2P48431 317 aa9.84□□□□□ -0.83
PFDN1-201ENST00000261813 CNPY1Q3B7I2 92 aa9.84□□□□□ -0.83
PFDN1-201ENST00000261813 Q6ZR03 302 aa9.84□□□□□ -0.83
PFDN1-201ENST00000261813 MRPL21Q7Z2W9 205 aaKnown RBP9.84□□□□□ -0.83
PFDN1-201ENST00000261813 OR5AS1Q8N127 324 aa9.84□□□□□ -0.83
PFDN1-201ENST00000261813 RGP1Q92546 391 aaPredicted RBP9.84□□□□□ -0.83
PFDN1-201ENST00000261813 AP3S1Q92572 193 aa9.84□□□□□ -0.83
PFDN1-201ENST00000261813 FOXRED1Q96CU9 486 aaPredicted RBP9.84□□□□□ -0.83
PFDN1-201ENST00000261813 CPNE2Q96FN4 548 aaPredicted RBP9.84□□□□□ -0.83
PFDN1-201ENST00000261813 FAM71F1Q96KD3 344 aaPredicted RBP9.84□□□□□ -0.83
PFDN1-201ENST00000261813 MRI1Q9BV20 369 aa9.84□□□□□ -0.83
PFDN1-201ENST00000261813 MS4A5Q9H3V2 200 aa9.84□□□□□ -0.83
PFDN1-201ENST00000261813 NOX4Q9NPH5 578 aa9.84□□□□□ -0.83
PFDN1-201ENST00000261813 PTTG2Q9NZH5 202 aa9.84□□□□□ -0.83
PFDN1-201ENST00000261813 GPR160Q9UJ42 338 aa9.84□□□□□ -0.83
PFDN1-201ENST00000261813 V9GYS6 101 aa9.84□□□□□ -0.83
PFDN1-201ENST00000261813 VPS13CQ709C8 3753 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 ARFGEF3Q5TH69 2177 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 IQCF6A8MYZ5 107 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 MAGEB3O15480 346 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 NCR1O76036 304 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 GHRHP01286 108 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 OCMP0CE72 109 aaPredicted RBP9.83□□□□□ -0.84
PFDN1-201ENST00000261813 RAB3BP20337 219 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 SDC2P34741 201 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 MAGEB1P43366 347 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 ZNF81P51508 661 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 EFNA4P52798 201 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 SPCS2Q15005 226 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 OR8B8Q15620 311 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 MOGQ16653 247 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 GFOD2Q3B7J2 385 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 Q5PR19 223 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 UTS2BQ765I0 119 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 CDH26Q8IXH8 852 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 NKAIN3Q8N8D7 197 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 BHLHE23Q8NDY6 225 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 OR13C5Q8NGS8 318 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 OR14K1Q8NGZ2 314 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 FGGYQ96C11 551 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 LYZL4Q96KX0 146 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 SOX7Q9BT81 388 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 RAB1BQ9H0U4 201 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 BARX1Q9HBU1 254 aaPredicted RBP9.83□□□□□ -0.84
PFDN1-201ENST00000261813 MSL2Q9HCI7 577 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 ABCB9Q9NP78 766 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 CYSLTR2Q9NS75 346 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 CCDC59Q9P031 241 aaKnown RBP9.83□□□□□ -0.84
PFDN1-201ENST00000261813 A3GALT2U3KPV4 340 aa9.83□□□□□ -0.84
PFDN1-201ENST00000261813 NIPBLQ6KC79 2804 aaeCLIP9.83□□□□□ -0.84
PFDN1-201ENST00000261813 hCG_38984A0A1B0GV85 526 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms