RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 VRK1Q99986 396 aaPredicted RBP17.62■□□□□ 0.41
RTCA-201ENST00000260563 SLC30A2Q9BRI3 323 aa17.62■□□□□ 0.41
RTCA-201ENST00000260563 CCDC59Q9P031 241 aaKnown RBP17.62■□□□□ 0.41
RTCA-201ENST00000260563 RHBDD3Q9Y3P4 386 aa17.62■□□□□ 0.41
RTCA-201ENST00000260563 CSMD1Q96PZ7 3565 aa17.62■□□□□ 0.41
RTCA-201ENST00000260563 POLQO75417 2590 aa17.62■□□□□ 0.41
RTCA-201ENST00000260563 SOX6P35712 828 aa17.62■□□□□ 0.41
RTCA-201ENST00000260563 RORCP51449 518 aa17.62■□□□□ 0.41
RTCA-201ENST00000260563 OR10A3P58181 314 aa17.62■□□□□ 0.41
RTCA-201ENST00000260563 DGUOKQ16854 277 aa17.62■□□□□ 0.41
RTCA-201ENST00000260563 TMEM42Q69YG0 159 aa17.62■□□□□ 0.41
RTCA-201ENST00000260563 KRT74Q7RTS7 529 aa17.62■□□□□ 0.41
RTCA-201ENST00000260563 NR2C2APQ86WQ0 139 aa17.62■□□□□ 0.41
RTCA-201ENST00000260563 GTF3AQ92664 365 aaKnown RBP17.62■□□□□ 0.41
RTCA-201ENST00000260563 MSL2Q9HCI7 577 aa17.62■□□□□ 0.41
RTCA-201ENST00000260563 MRPL15Q9P015 296 aaKnown RBP17.62■□□□□ 0.41
RTCA-201ENST00000260563 ZSCAN5BA6NJL1 495 aa17.61■□□□□ 0.41
RTCA-201ENST00000260563 ANXA2P2A6NMY6 339 aa17.61■□□□□ 0.41
RTCA-201ENST00000260563 C17orf100A8MU93 164 aa17.61■□□□□ 0.41
RTCA-201ENST00000260563 GMDSO60547 372 aa17.61■□□□□ 0.41
RTCA-201ENST00000260563 LILRA1O75019 489 aa17.61■□□□□ 0.41
RTCA-201ENST00000260563 ALX3O95076 343 aa17.61■□□□□ 0.41
RTCA-201ENST00000260563 CST4P01036 141 aa17.61■□□□□ 0.41
RTCA-201ENST00000260563 NRASP01111 189 aa17.61■□□□□ 0.41
RTCA-201ENST00000260563 ERCC1P07992 297 aaPredicted RBP17.61■□□□□ 0.41
RTCA-201ENST00000260563 BDKRB2P30411 391 aa17.61■□□□□ 0.41
RTCA-201ENST00000260563 UBE2V2Q15819 145 aa17.61■□□□□ 0.41
RTCA-201ENST00000260563 UBASH3BQ8TF42 649 aa17.61■□□□□ 0.41
RTCA-201ENST00000260563 PIGCQ92535 297 aa17.61■□□□□ 0.41
RTCA-201ENST00000260563 GFI1Q99684 422 aa17.61■□□□□ 0.41
RTCA-201ENST00000260563 RAB1BQ9H0U4 201 aa17.61■□□□□ 0.41
RTCA-201ENST00000260563 TMEM138Q9NPI0 162 aa17.61■□□□□ 0.41
RTCA-201ENST00000260563 GPR173Q9NS66 373 aa17.61■□□□□ 0.41
RTCA-201ENST00000260563 BEX4Q9NWD9 120 aaPredicted RBP17.61■□□□□ 0.41
RTCA-201ENST00000260563 PTTG2Q9NZH5 202 aa17.61■□□□□ 0.41
RTCA-201ENST00000260563 IGKV1-9A0A0C4DH69 117 aa17.6■□□□□ 0.41
RTCA-201ENST00000260563 A0A0G2JK05 382 aa17.6■□□□□ 0.41
RTCA-201ENST00000260563 MEGF11A6BM72 1044 aa17.6■□□□□ 0.41
RTCA-201ENST00000260563 ANKRD30BLA7E2S9 258 aa17.6■□□□□ 0.41
RTCA-201ENST00000260563 ATF1P18846 271 aa17.6■□□□□ 0.41
RTCA-201ENST00000260563 PSMD7P51665 324 aa17.6■□□□□ 0.41
RTCA-201ENST00000260563 SFXN4Q6P4A7 337 aa17.6■□□□□ 0.41
RTCA-201ENST00000260563 Q6ZR03 302 aa17.6■□□□□ 0.41
RTCA-201ENST00000260563 ZCCHC24Q8N2G6 241 aaKnown RBP17.6■□□□□ 0.41
RTCA-201ENST00000260563 NKAIN3Q8N8D7 197 aa17.6■□□□□ 0.41
RTCA-201ENST00000260563 DNAAF1Q8NEP3 725 aa17.6■□□□□ 0.41
RTCA-201ENST00000260563 OR13G1Q8NGZ3 307 aa17.6■□□□□ 0.41
RTCA-201ENST00000260563 PAPOLGQ9BWT3 736 aaKnown RBP17.6■□□□□ 0.41
RTCA-201ENST00000260563 BARHL1Q9BZE3 327 aa17.6■□□□□ 0.41
RTCA-201ENST00000260563 TMEM100Q9NV29 134 aa17.6■□□□□ 0.41
RTCA-201ENST00000260563 ZDHHC8Q9ULC8 765 aa17.6■□□□□ 0.41
RTCA-201ENST00000260563 V9GY05 133 aa17.6■□□□□ 0.41
RTCA-201ENST00000260563 USF3Q68DE3 2245 aa17.6■□□□□ 0.41
RTCA-201ENST00000260563 TANC2Q9HCD6 1990 aa17.6■□□□□ 0.41
RTCA-201ENST00000260563 NOTOA8MTQ0 251 aa17.59■□□□□ 0.41
RTCA-201ENST00000260563 SPRY3O43610 288 aa17.59■□□□□ 0.41
RTCA-201ENST00000260563 OCMP0CE72 109 aaPredicted RBP17.59■□□□□ 0.41
RTCA-201ENST00000260563 CNN3Q15417 329 aaKnown RBP17.59■□□□□ 0.41
RTCA-201ENST00000260563 DEFB113Q30KQ7 82 aa17.59■□□□□ 0.41
RTCA-201ENST00000260563 CROCCP3Q8IVE0 287 aa17.59■□□□□ 0.41
RTCA-201ENST00000260563 TECTBQ96PL2 329 aa17.59■□□□□ 0.41
RTCA-201ENST00000260563 SORCS2Q96PQ0 1159 aa17.59■□□□□ 0.41
RTCA-201ENST00000260563 DIRC2Q96SL1 478 aa17.59■□□□□ 0.41
RTCA-201ENST00000260563 SLIRPQ9GZT3 109 aaKnown RBP17.59■□□□□ 0.41
RTCA-201ENST00000260563 SLC22A4Q9H015 551 aa17.59■□□□□ 0.41
RTCA-201ENST00000260563 NOP16Q9Y3C1 178 aaKnown RBP17.59■□□□□ 0.41
RTCA-201ENST00000260563 ZNF850A8MQ14 1090 aa17.58■□□□□ 0.41
RTCA-201ENST00000260563 MAGEB3O15480 346 aa17.58■□□□□ 0.41
RTCA-201ENST00000260563 IGHV1-46P01743 117 aa17.58■□□□□ 0.41
RTCA-201ENST00000260563 PTH2RP49190 550 aa17.58■□□□□ 0.41
RTCA-201ENST00000260563 PRDX4Q13162 271 aa17.58■□□□□ 0.41
RTCA-201ENST00000260563 PCGF3Q3KNV8 242 aa17.58■□□□□ 0.41
RTCA-201ENST00000260563 DMRTC1Q5HYR2 192 aa17.58■□□□□ 0.41
RTCA-201ENST00000260563 DDI2Q5TDH0 399 aa17.58■□□□□ 0.41
RTCA-201ENST00000260563 GLT8D1Q68CQ7 371 aa17.58■□□□□ 0.41
RTCA-201ENST00000260563 MOB3CQ70IA8 216 aa17.58■□□□□ 0.41
RTCA-201ENST00000260563 OR2Z1Q8NG97 314 aa17.58■□□□□ 0.41
RTCA-201ENST00000260563 OR10AD1Q8NGE0 317 aa17.58■□□□□ 0.41
RTCA-201ENST00000260563 OR52N4Q8NGI2 321 aa17.58■□□□□ 0.41
RTCA-201ENST00000260563 MBD6Q96DN6 1003 aa17.58■□□□□ 0.41
RTCA-201ENST00000260563 ELMOD3Q96FG2 381 aa17.58■□□□□ 0.41
RTCA-201ENST00000260563 ADAT1Q9BUB4 502 aaKnown RBP17.58■□□□□ 0.41
RTCA-201ENST00000260563 PPP1R3EQ9H7J1 279 aa17.58■□□□□ 0.41
RTCA-201ENST00000260563 ZNF701Q9NV72 531 aaPredicted RBP17.58■□□□□ 0.41
RTCA-201ENST00000260563 ALDOBP05062 364 aa17.57■□□□□ 0.4
RTCA-201ENST00000260563 ADH4P08319 380 aa17.57■□□□□ 0.4
RTCA-201ENST00000260563 HCKP08631 526 aa17.57■□□□□ 0.4
RTCA-201ENST00000260563 PAX1P15863 534 aa17.57■□□□□ 0.4
RTCA-201ENST00000260563 CA6P23280 308 aa17.57■□□□□ 0.4
RTCA-201ENST00000260563 TNFSF4P23510 183 aa17.57■□□□□ 0.4
RTCA-201ENST00000260563 AZGP1P25311 298 aaKnown RBP17.57■□□□□ 0.4
RTCA-201ENST00000260563 FAM209AQ5JX71 171 aa17.57■□□□□ 0.4
RTCA-201ENST00000260563 PLCXD3Q63HM9 321 aa17.57■□□□□ 0.4
RTCA-201ENST00000260563 ZDHHC23Q8IYP9 409 aa17.57■□□□□ 0.4
RTCA-201ENST00000260563 NPRL2Q8WTW4 380 aa17.57■□□□□ 0.4
RTCA-201ENST00000260563 SPSB1Q96BD6 273 aa17.57■□□□□ 0.4
RTCA-201ENST00000260563 PERPQ96FX8 193 aa17.57■□□□□ 0.4
RTCA-201ENST00000260563 GSX2Q9BZM3 304 aa17.57■□□□□ 0.4
RTCA-201ENST00000260563 NEK6Q9HC98 313 aa17.57■□□□□ 0.4
RTCA-201ENST00000260563 MPC1Q9Y5U8 109 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms