RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 USF2Q15853 346 aaPredicted RBP18.09■□□□□ 0.49
RARA-201ENST00000254066 PTCRAQ6ISU1 281 aaPredicted RBP18.09■□□□□ 0.49
RARA-201ENST00000254066 OR52N4Q8NGI2 321 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 OR2I1PQ8NGU4 316 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 FLVCR1-AS1Q8TAF5 88 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 ZNF519Q8TB69 540 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 ACTR3CQ9C0K3 210 aaPredicted RBP18.09■□□□□ 0.49
RARA-201ENST00000254066 CERS4Q9HA82 394 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 MUC22E2RYF6 1773 aaPredicted RBP18.09■□□□□ 0.49
RARA-201ENST00000254066 CCDC187A0A096LP49 1063 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 CCL16O15467 120 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 CEACAM5P06731 702 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 GLRA1P23415 457 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 PPM1AP35813 382 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 FNDC7Q5VTL7 733 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 GGNBP1Q5YKI7 109 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 BCORP1Q8N888 145 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 COL25A1Q9BXS0 654 aaPredicted RBP18.09■□□□□ 0.49
RARA-201ENST00000254066 HCFC1R1Q9NWW0 138 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 PITPNC1Q9UKF7 332 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 SLCO1B1Q9Y6L6 691 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 HSD17B6O14756 317 aa18.08■□□□□ 0.49
RARA-201ENST00000254066 SLC16A7O60669 478 aa18.08■□□□□ 0.49
RARA-201ENST00000254066 TRGC2P03986 189 aa18.08■□□□□ 0.49
RARA-201ENST00000254066 ERVFRD-1P60508 538 aa18.08■□□□□ 0.49
RARA-201ENST00000254066 GFI1BQ5VTD9 330 aa18.08■□□□□ 0.49
RARA-201ENST00000254066 C1orf140Q5VVS0 124 aa18.08■□□□□ 0.49
RARA-201ENST00000254066 ZNF385CQ66K41 422 aaPredicted RBP18.08■□□□□ 0.49
RARA-201ENST00000254066 SLC35E3Q7Z769 313 aa18.08■□□□□ 0.49
RARA-201ENST00000254066 ZNF761Q86XN6 746 aaPredicted RBP18.08■□□□□ 0.49
RARA-201ENST00000254066 TAAR8Q969N4 342 aa18.08■□□□□ 0.49
RARA-201ENST00000254066 RERGQ96A58 199 aaPredicted RBP18.08■□□□□ 0.49
RARA-201ENST00000254066 CDCA3Q99618 268 aaPredicted RBP18.08■□□□□ 0.49
RARA-201ENST00000254066 SLC25A31Q9H0C2 315 aa18.08■□□□□ 0.49
RARA-201ENST00000254066 WASF3Q9UPY6 502 aa18.08■□□□□ 0.49
RARA-201ENST00000254066 CYB5BO43169 146 aa18.08■□□□□ 0.48
RARA-201ENST00000254066 TRGC1P0CF51 173 aa18.08■□□□□ 0.48
RARA-201ENST00000254066 AMY2BP19961 511 aa18.08■□□□□ 0.48
RARA-201ENST00000254066 C1QL3Q5VWW1 255 aa18.08■□□□□ 0.48
RARA-201ENST00000254066 FIGLAQ6QHK4 219 aa18.08■□□□□ 0.48
RARA-201ENST00000254066 TMEFF1Q8IYR6 380 aa18.08■□□□□ 0.48
RARA-201ENST00000254066 APCDD1LQ8NCL9 501 aa18.08■□□□□ 0.48
RARA-201ENST00000254066 KCNG3Q8TAE7 436 aa18.08■□□□□ 0.48
RARA-201ENST00000254066 FGGYQ96C11 551 aa18.08■□□□□ 0.48
RARA-201ENST00000254066 TVP23CQ96ET8 276 aa18.08■□□□□ 0.48
RARA-201ENST00000254066 MVB12AQ96EY5 273 aa18.08■□□□□ 0.48
RARA-201ENST00000254066 ZFYVE21Q9BQ24 234 aa18.08■□□□□ 0.48
RARA-201ENST00000254066 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.08■□□□□ 0.48
RARA-201ENST00000254066 MRPS2Q9Y399 296 aaKnown RBP18.08■□□□□ 0.48
RARA-201ENST00000254066 MYO9BQ13459 2157 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 EPOPA6NHQ4 379 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 ZNF727A8MUV8 499 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 RRP8O43159 456 aaKnown RBP18.07■□□□□ 0.48
RARA-201ENST00000254066 QDPRP09417 244 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 CT45A8P0DMV1 189 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 CT45A9P0DMV2 189 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 INSM1Q01101 510 aaPredicted RBP18.07■□□□□ 0.48
RARA-201ENST00000254066 PCK2Q16822 640 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 CT45A2Q5DJT8 189 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 SGPP2Q8IWX5 399 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 TMEM156Q8N614 296 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 OR5D14Q8NGL3 314 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 HIST1H2BLQ99880 126 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 TMEM242Q9NWH2 141 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 LSM5Q9Y4Y9 91 aaKnown RBP18.07■□□□□ 0.48
RARA-201ENST00000254066 HS3ST3B1Q9Y662 390 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 BGLAPP02818 100 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 APOBEC1P41238 236 aaKnown RBP18.07■□□□□ 0.48
RARA-201ENST00000254066 FHITP49789 147 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 MMP16P51512 607 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 DLK1P80370 383 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 ZP2Q05996 745 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 COX15Q7KZN9 410 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 PRSS41Q7RTY9 318 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 SMOC1Q9H4F8 434 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 KIAA1456Q9P272 454 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 SCN2AQ99250 2005 aa18.07■□□□□ 0.48
RARA-201ENST00000254066 LMX1BO60663 402 aa18.06■□□□□ 0.48
RARA-201ENST00000254066 SRP19P09132 144 aaKnown RBP18.06■□□□□ 0.48
RARA-201ENST00000254066 PTGER4P35408 488 aa18.06■□□□□ 0.48
RARA-201ENST00000254066 PPP1CCP36873 323 aaKnown RBP18.06■□□□□ 0.48
RARA-201ENST00000254066 DHPSP49366 369 aaPredicted RBP18.06■□□□□ 0.48
RARA-201ENST00000254066 TCEA2Q15560 299 aa18.06■□□□□ 0.48
RARA-201ENST00000254066 PLAC9Q5JTB6 97 aa18.06■□□□□ 0.48
RARA-201ENST00000254066 MARCH3Q86UD3 253 aa18.06■□□□□ 0.48
RARA-201ENST00000254066 ABHD5Q8WTS1 349 aa18.06■□□□□ 0.48
RARA-201ENST00000254066 FAM122AQ96E09 287 aa18.06■□□□□ 0.48
RARA-201ENST00000254066 TCEAL2Q9H3H9 227 aaPredicted RBP18.06■□□□□ 0.48
RARA-201ENST00000254066 WFDC1Q9HC57 220 aa18.06■□□□□ 0.48
RARA-201ENST00000254066 SPTBP11277 2137 aa18.06■□□□□ 0.48
RARA-201ENST00000254066 KIF26BQ2KJY2 2108 aa18.06■□□□□ 0.48
RARA-201ENST00000254066 A8MXE2 369 aa18.06■□□□□ 0.48
RARA-201ENST00000254066 HSPB1P04792 205 aaKnown RBP18.06■□□□□ 0.48
RARA-201ENST00000254066 GABRA4P48169 554 aa18.06■□□□□ 0.48
RARA-201ENST00000254066 ZNF343Q6P1L6 599 aa18.06■□□□□ 0.48
RARA-201ENST00000254066 TMEM104Q8NE00 496 aa18.06■□□□□ 0.48
RARA-201ENST00000254066 NICN1Q9BSH3 213 aa18.06■□□□□ 0.48
RARA-201ENST00000254066 TXNIPQ9H3M7 391 aa18.06■□□□□ 0.48
RARA-201ENST00000254066 HEATR5AQ86XA9 2040 aa18.05■□□□□ 0.48
RARA-201ENST00000254066 A0A0A6YYD4 124 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms