RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 TEX12Q9BXU0 123 aa17.33■□□□□ 0.36
NEDD8-201ENST00000250495 RNF114Q9Y508 228 aa17.33■□□□□ 0.36
NEDD8-201ENST00000250495 NKX6-3A6NJ46 265 aa17.32■□□□□ 0.36
NEDD8-201ENST00000250495 AQP12BA6NM10 295 aa17.32■□□□□ 0.36
NEDD8-201ENST00000250495 FBP1P09467 338 aa17.32■□□□□ 0.36
NEDD8-201ENST00000250495 AMY2BP19961 511 aa17.32■□□□□ 0.36
NEDD8-201ENST00000250495 ACKR3P25106 362 aa17.32■□□□□ 0.36
NEDD8-201ENST00000250495 GMFBP60983 142 aa17.32■□□□□ 0.36
NEDD8-201ENST00000250495 TMEM179BQ7Z7N9 219 aa17.32■□□□□ 0.36
NEDD8-201ENST00000250495 AQP12AQ8IXF9 295 aa17.32■□□□□ 0.36
NEDD8-201ENST00000250495 PAPD5Q8NDF8 572 aaKnown RBP17.32■□□□□ 0.36
NEDD8-201ENST00000250495 C8orf46Q8TAG6 207 aa17.32■□□□□ 0.36
NEDD8-201ENST00000250495 CANT1Q8WVQ1 401 aa17.32■□□□□ 0.36
NEDD8-201ENST00000250495 ITFG2Q969R8 447 aa17.32■□□□□ 0.36
NEDD8-201ENST00000250495 WDR13Q9H1Z4 485 aa17.32■□□□□ 0.36
NEDD8-201ENST00000250495 SNTG1Q9NSN8 517 aa17.32■□□□□ 0.36
NEDD8-201ENST00000250495 TIMM23O14925 209 aa17.31■□□□□ 0.36
NEDD8-201ENST00000250495 E2F6O75461 281 aa17.31■□□□□ 0.36
NEDD8-201ENST00000250495 ANXA8P13928 327 aa17.31■□□□□ 0.36
NEDD8-201ENST00000250495 PSMA6P60900 246 aaKnown RBP17.31■□□□□ 0.36
NEDD8-201ENST00000250495 ACTR3P61158 418 aa17.31■□□□□ 0.36
NEDD8-201ENST00000250495 RPS7P62081 194 aaKnown RBP17.31■□□□□ 0.36
NEDD8-201ENST00000250495 CDK5Q00535 292 aa17.31■□□□□ 0.36
NEDD8-201ENST00000250495 DEFA6Q01524 100 aa17.31■□□□□ 0.36
NEDD8-201ENST00000250495 ZNF788Q6ZQV5 615 aa17.31■□□□□ 0.36
NEDD8-201ENST00000250495 C1orf122Q6ZSJ8 110 aa17.31■□□□□ 0.36
NEDD8-201ENST00000250495 KRT77Q7Z794 578 aa17.31■□□□□ 0.36
NEDD8-201ENST00000250495 ZDHHC23Q8IYP9 409 aa17.31■□□□□ 0.36
NEDD8-201ENST00000250495 OR8B12Q8NGG6 310 aa17.31■□□□□ 0.36
NEDD8-201ENST00000250495 LINC01006Q8NI28 216 aa17.31■□□□□ 0.36
NEDD8-201ENST00000250495 H1FXQ92522 213 aaKnown RBP17.31■□□□□ 0.36
NEDD8-201ENST00000250495 CLPTM1LQ96KA5 538 aa17.31■□□□□ 0.36
NEDD8-201ENST00000250495 LYZL4Q96KX0 146 aa17.31■□□□□ 0.36
NEDD8-201ENST00000250495 SIRT7Q9NRC8 400 aa17.31■□□□□ 0.36
NEDD8-201ENST00000250495 LAMP5Q9UJQ1 280 aa17.31■□□□□ 0.36
NEDD8-201ENST00000250495 BTBD17A6NE02 478 aa17.3■□□□□ 0.36
NEDD8-201ENST00000250495 ACOD1A6NK06 481 aa17.3■□□□□ 0.36
NEDD8-201ENST00000250495 M0QZ24 198 aa17.3■□□□□ 0.36
NEDD8-201ENST00000250495 AKR7A2O43488 359 aa17.3■□□□□ 0.36
NEDD8-201ENST00000250495 ALOX5APP20292 161 aa17.3■□□□□ 0.36
NEDD8-201ENST00000250495 MAP2K3P46734 347 aa17.3■□□□□ 0.36
NEDD8-201ENST00000250495 KPNB1Q14974 876 aaKnown RBP17.3■□□□□ 0.36
NEDD8-201ENST00000250495 KCTD18Q6PI47 426 aaPredicted RBP17.3■□□□□ 0.36
NEDD8-201ENST00000250495 ANGPTL6Q8NI99 470 aa17.3■□□□□ 0.36
NEDD8-201ENST00000250495 FAM81AQ8TBF8 368 aa17.3■□□□□ 0.36
NEDD8-201ENST00000250495 STMN2Q93045 179 aa17.3■□□□□ 0.36
NEDD8-201ENST00000250495 YY1AP1Q9H869 796 aa17.3■□□□□ 0.36
NEDD8-201ENST00000250495 SLC25A10Q9UBX3 287 aaPredicted RBP17.3■□□□□ 0.36
NEDD8-201ENST00000250495 LRP12Q9Y561 859 aa17.3■□□□□ 0.36
NEDD8-201ENST00000250495 ZNF816-ZNF321PA0A0X1KG74 233 aa17.29■□□□□ 0.36
NEDD8-201ENST00000250495 CLPXO76031 633 aa17.29■□□□□ 0.36
NEDD8-201ENST00000250495 GLRA1P23415 457 aa17.29■□□□□ 0.36
NEDD8-201ENST00000250495 DEGS2Q6QHC5 323 aa17.29■□□□□ 0.36
NEDD8-201ENST00000250495 KRT74Q7RTS7 529 aa17.29■□□□□ 0.36
NEDD8-201ENST00000250495 Q8N7P7 452 aa17.29■□□□□ 0.36
NEDD8-201ENST00000250495 ZSCAN4Q8NAM6 433 aaPredicted RBP17.29■□□□□ 0.36
NEDD8-201ENST00000250495 HPSE2Q8WWQ2 592 aa17.29■□□□□ 0.36
NEDD8-201ENST00000250495 GAFA1Q96PS6 74 aa17.29■□□□□ 0.36
NEDD8-201ENST00000250495 YIPF3Q9GZM5 350 aa17.29■□□□□ 0.36
NEDD8-201ENST00000250495 NLKQ9UBE8 527 aa17.29■□□□□ 0.36
NEDD8-201ENST00000250495 KLHDC2Q9Y2U9 406 aa17.29■□□□□ 0.36
NEDD8-201ENST00000250495 WNK1Q9H4A3 2382 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 A0A0U1RQV5 110 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 OR2AT4A6NND4 320 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 RNASEK-C17orf49H0YIS7 233 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 M0R1W7 72 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 NPFFO15130 113 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 SIGLEC5O15389 551 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 ACAA1P09110 424 aaPredicted RBP17.28■□□□□ 0.36
NEDD8-201ENST00000250495 SELLP14151 372 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 ATP6V1B1P15313 513 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 NDUFB7P17568 137 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 DCTDP32321 178 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 GPM6AP51674 278 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 CAV3P56539 151 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 GNG3P63215 75 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 BLMHQ13867 455 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 DGUOKQ16854 277 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 PDLIM3Q53GG5 364 aaPredicted RBP17.28■□□□□ 0.36
NEDD8-201ENST00000250495 ZNF671Q8TAW3 534 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 MROQ9BYG7 248 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 ZNRD1Q9P1U0 126 aa17.28■□□□□ 0.36
NEDD8-201ENST00000250495 TMEM269A0A1B0GVZ9 245 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 A0A1W2PQ09 198 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 ZNF732B4DXR9 585 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 FKBP6O75344 327 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 PAHP00439 452 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 PRKACGP22612 351 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 SLC2A5P22732 501 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 GABRA2P47869 451 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 UBE2E1P51965 193 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 APOFQ13790 326 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 SNAPC1Q16533 368 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 TAF9Q16594 264 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 CEACAM21Q3KPI0 293 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 C1orf146Q5VVC0 180 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 NCR3LG1Q68D85 454 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 THAP5Q7Z6K1 395 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 BBS1Q8NFJ9 593 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 OR5A2Q8NGI9 324 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms