RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 PDCD10Q9BUL8 212 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 ST6GALNAC5Q9BVH7 336 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 SLCO5A1Q9H2Y9 848 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 ESRP2Q9H6T0 727 aaKnown RBP13.81□□□□□ -0.2
LRFN1-201ENST00000248668 GPR173Q9NS66 373 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 PLA2G3Q9NZ20 509 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 R4GN57 208 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 A0A0A6YYH2 397 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 OR14I1A6ND48 311 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 A6NJ64 397 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 DNASE2O00115 360 aaPredicted RBP13.81□□□□□ -0.2
LRFN1-201ENST00000248668 CD74P04233 296 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 CELA3AP09093 270 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 PPP1R1AQ13522 171 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 NHLRC3Q5JS37 347 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 PGAP1Q75T13 922 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 GGNQ86UU5 652 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 SLC25A21Q9BQT8 299 aaPredicted RBP13.81□□□□□ -0.2
LRFN1-201ENST00000248668 PRR13Q9NZ81 148 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 FOXD3Q9UJU5 478 aaPredicted RBP13.81□□□□□ -0.2
LRFN1-201ENST00000248668 FLVCR1Q9Y5Y0 555 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 AVPR2P30518 371 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 SRD5A2P31213 254 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 RAC3P60763 192 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 C10orf128Q5T292 105 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 RGS7BPQ6MZT1 257 aaPredicted RBP13.8□□□□□ -0.2
LRFN1-201ENST00000248668 LINC00696Q6ZRV3 163 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 AAED1Q7RTV5 226 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 BATF2Q8N1L9 274 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 OR4K15Q8NH41 348 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 MARCH1Q8TCQ1 289 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 LRFN1Q9P244 771 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 PPP3CBP16298 524 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 CD34P28906 385 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 CASRP41180 1078 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 CLDN15P56746 228 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 HGFACQ04756 655 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 BEX5Q5H9J7 111 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 KCNG3Q8TAE7 436 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 STRADBQ9C0K7 418 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 PFDN2Q9UHV9 154 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 CFAP47Q6ZTR5 3102 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 PCSK5Q92824 1860 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 FAM166BA8MTA8 275 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 SDCBPO00560 298 aaPredicted RBP13.8□□□□□ -0.2
LRFN1-201ENST00000248668 ANGPTL7O43827 346 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 HTR3BO95264 441 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 NR2C1P13056 603 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 IKZF1Q13422 519 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 LY6G6FQ5SQ64 297 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 FAM219AQ8IW50 185 aa13.8□□□□□ -0.2
LRFN1-201ENST00000248668 PCNX2A6NKB5 2137 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 APOC1P02654 83 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 LCATP04180 440 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 GP1BAP07359 652 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 DLSTP36957 453 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 NPY4RP50391 375 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 AKIRIN2Q53H80 203 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 FGFBP3Q8TAT2 258 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 PSMF1Q92530 271 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 KRBOX1C9JBD0 128 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 HIST1H1DP16402 221 aaKnown RBP13.79□□□□□ -0.2
LRFN1-201ENST00000248668 ZNF32P17041 273 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 GABRR1P24046 479 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 ACKR3P25106 362 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 SSPNQ14714 243 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 MICBQ29980 383 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 CEACAM16Q2WEN9 425 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 NKAPLQ5M9Q1 402 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 CDCP2Q5VXM1 449 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 DHRS13Q6UX07 377 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 CCDC36Q8IYA8 594 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 C20orf196Q8IYI0 205 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 GPR137CQ8N3F9 429 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 PNLDC1Q8NA58 520 aaKnown RBP13.79□□□□□ -0.2
LRFN1-201ENST00000248668 SIGLEC12Q96PQ1 595 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 PRRT1Q99946 306 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 FAM230AA0A1W2PPH8 454 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 KCNAB3O43448 404 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 DHRS3O75911 302 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 FABP1P07148 127 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 PTGFRP43088 359 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 FLI1Q01543 452 aaPredicted RBP13.79□□□□□ -0.2
LRFN1-201ENST00000248668 MEF2DQ14814 521 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 TMUB2Q71RG4 321 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 OVCH2Q7RTZ1 564 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 S100A13Q99584 98 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 FN3KRPQ9HA64 309 aa13.79□□□□□ -0.2
LRFN1-201ENST00000248668 GJE1A6NN92 205 aa13.78□□□□□ -0.2
LRFN1-201ENST00000248668 SP9P0CG40 484 aa13.78□□□□□ -0.2
LRFN1-201ENST00000248668 CCL1P22362 96 aa13.78□□□□□ -0.2
LRFN1-201ENST00000248668 ITGA3P26006 1051 aa13.78□□□□□ -0.2
LRFN1-201ENST00000248668 BLVRBP30043 206 aaPredicted RBP13.78□□□□□ -0.2
LRFN1-201ENST00000248668 IL13RA1P78552 427 aa13.78□□□□□ -0.2
LRFN1-201ENST00000248668 PAN3Q58A45 887 aaKnown RBP13.78□□□□□ -0.2
LRFN1-201ENST00000248668 ZNF581Q9P0T4 197 aa13.78□□□□□ -0.2
LRFN1-201ENST00000248668 KIF25Q9UIL4 384 aa13.78□□□□□ -0.2
LRFN1-201ENST00000248668 SPTA1P02549 2419 aa13.78□□□□□ -0.2
LRFN1-201ENST00000248668 ZFHX2Q9C0A1 2572 aaPredicted RBP13.78□□□□□ -0.2
LRFN1-201ENST00000248668 SPRY1O43609 319 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms