RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 HPSE2Q8WWQ2 592 aa17.1■□□□□ 0.33
RHBDD3-201ENST00000216085 MAGEB3O15480 346 aa17.1■□□□□ 0.33
RHBDD3-201ENST00000216085 CDC14BO60729 498 aa17.1■□□□□ 0.33
RHBDD3-201ENST00000216085 LY6HO94772 140 aa17.1■□□□□ 0.33
RHBDD3-201ENST00000216085 INMTO95050 263 aa17.1■□□□□ 0.33
RHBDD3-201ENST00000216085 GRPP07492 148 aa17.1■□□□□ 0.33
RHBDD3-201ENST00000216085 RAB3AP20336 220 aa17.1■□□□□ 0.33
RHBDD3-201ENST00000216085 GPM6AP51674 278 aa17.1■□□□□ 0.33
RHBDD3-201ENST00000216085 FUT6P51993 359 aa17.1■□□□□ 0.33
RHBDD3-201ENST00000216085 RPS11P62280 158 aaKnown RBP eCLIP17.1■□□□□ 0.33
RHBDD3-201ENST00000216085 Q5PR19 223 aa17.1■□□□□ 0.33
RHBDD3-201ENST00000216085 OR13C9Q8NGT0 318 aa17.1■□□□□ 0.33
RHBDD3-201ENST00000216085 MUL1Q969V5 352 aa17.1■□□□□ 0.33
RHBDD3-201ENST00000216085 BORCS8Q96FH0 119 aa17.1■□□□□ 0.33
RHBDD3-201ENST00000216085 MRPS26Q9BYN8 205 aaKnown RBP17.1■□□□□ 0.33
RHBDD3-201ENST00000216085 CHODLQ9H9P2 273 aa17.1■□□□□ 0.33
RHBDD3-201ENST00000216085 ZNF732B4DXR9 585 aa17.09■□□□□ 0.33
RHBDD3-201ENST00000216085 SULT1B1O43704 296 aa17.09■□□□□ 0.33
RHBDD3-201ENST00000216085 RGS9O75916 674 aaPredicted RBP17.09■□□□□ 0.33
RHBDD3-201ENST00000216085 PTBP3O95758 552 aaKnown RBP17.09■□□□□ 0.33
RHBDD3-201ENST00000216085 ATF1P18846 271 aa17.09■□□□□ 0.33
RHBDD3-201ENST00000216085 ACSM3Q53FZ2 586 aa17.09■□□□□ 0.33
RHBDD3-201ENST00000216085 PEG10Q86TG7 708 aaKnown RBP17.09■□□□□ 0.33
RHBDD3-201ENST00000216085 ZNF573Q86YE8 665 aa17.09■□□□□ 0.33
RHBDD3-201ENST00000216085 C1orf87Q8N0U7 546 aa17.09■□□□□ 0.33
RHBDD3-201ENST00000216085 ZNF525Q8N782 197 aa17.09■□□□□ 0.33
RHBDD3-201ENST00000216085 DNAAF1Q8NEP3 725 aa17.09■□□□□ 0.33
RHBDD3-201ENST00000216085 OR1M1Q8NGA1 313 aa17.09■□□□□ 0.33
RHBDD3-201ENST00000216085 CCL17Q92583 94 aa17.09■□□□□ 0.33
RHBDD3-201ENST00000216085 TMEM203Q969S6 136 aa17.09■□□□□ 0.33
RHBDD3-201ENST00000216085 GCM1Q9NP62 436 aa17.09■□□□□ 0.33
RHBDD3-201ENST00000216085 LRP5LA4QPB2 252 aa17.08■□□□□ 0.33
RHBDD3-201ENST00000216085 NDUFS8O00217 210 aa17.08■□□□□ 0.33
RHBDD3-201ENST00000216085 ALX3O95076 343 aa17.08■□□□□ 0.33
RHBDD3-201ENST00000216085 UBE2V2Q15819 145 aa17.08■□□□□ 0.33
RHBDD3-201ENST00000216085 PRAMEF6Q5VXH4 476 aa17.08■□□□□ 0.33
RHBDD3-201ENST00000216085 MOGAT3Q86VF5 341 aa17.08■□□□□ 0.33
RHBDD3-201ENST00000216085 NPRL2Q8WTW4 380 aa17.08■□□□□ 0.33
RHBDD3-201ENST00000216085 PHYHIPQ92561 330 aa17.08■□□□□ 0.33
RHBDD3-201ENST00000216085 FAM168AQ92567 244 aa17.08■□□□□ 0.33
RHBDD3-201ENST00000216085 DERL3Q96Q80 235 aa17.08■□□□□ 0.33
RHBDD3-201ENST00000216085 PPP1R3EQ9H7J1 279 aa17.08■□□□□ 0.33
RHBDD3-201ENST00000216085 UFSP2Q9NUQ7 469 aa17.08■□□□□ 0.33
RHBDD3-201ENST00000216085 IGHV3-64DA0A0J9YX35 117 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 LOC100289279A0A1B0GTE1 492 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 FAM230AA0A1W2PPH8 454 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 TRIM64CA6NLI5 447 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 CLDN25C9JDP6 229 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 ARL6IP5O75915 188 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 HCKP08631 526 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 AZGP1P25311 298 aaKnown RBP17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 THBS2P35442 1172 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 RBP2P50120 134 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 ATP1B3P54709 279 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 RPS25P62851 125 aaKnown RBP17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 ZNF154Q13106 437 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 CLEC12BQ2HXU8 276 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 LHFPL2Q6ZUX7 228 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 TRMT10AQ8TBZ6 339 aaKnown RBP17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 TIMD4Q96H15 378 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 PIMREGQ9BSJ6 248 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 TMEM106BQ9NUM4 274 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 TAS2R4Q9NYW5 299 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 ITGB1BP2Q9UKP3 347 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 hCG_1807616A0A1W2PRN6 198 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 FSTP19883 344 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 SSX1Q16384 188 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 ZNF181Q2M3W8 571 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 CEACAM19Q7Z692 300 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 Q8TCH9 128 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 SLITRK2Q9H156 845 aa17.07■□□□□ 0.32
RHBDD3-201ENST00000216085 CSMD1Q96PZ7 3565 aa17.06■□□□□ 0.32
RHBDD3-201ENST00000216085 TRBV5-7A0A0A0MS05 114 aa17.06■□□□□ 0.32
RHBDD3-201ENST00000216085 PQLC2LA1A4F0 135 aa17.06■□□□□ 0.32
RHBDD3-201ENST00000216085 GALP22466 123 aa17.06■□□□□ 0.32
RHBDD3-201ENST00000216085 TMEM33P57088 247 aa17.06■□□□□ 0.32
RHBDD3-201ENST00000216085 FAM76BQ5HYJ3 339 aa17.06■□□□□ 0.32
RHBDD3-201ENST00000216085 TCF7L1Q9HCS4 588 aa17.06■□□□□ 0.32
RHBDD3-201ENST00000216085 NOX4Q9NPH5 578 aa17.06■□□□□ 0.32
RHBDD3-201ENST00000216085 TMEM138Q9NPI0 162 aa17.06■□□□□ 0.32
RHBDD3-201ENST00000216085 C1orf123Q9NWV4 160 aa17.06■□□□□ 0.32
RHBDD3-201ENST00000216085 FOXJ3Q9UPW0 622 aa17.06■□□□□ 0.32
RHBDD3-201ENST00000216085 POLDIP2Q9Y2S7 368 aa17.06■□□□□ 0.32
RHBDD3-201ENST00000216085 SMIM18P0DKX4 95 aa17.05■□□□□ 0.32
RHBDD3-201ENST00000216085 JUNBP17275 347 aaPredicted RBP17.05■□□□□ 0.32
RHBDD3-201ENST00000216085 COL8A2P25067 703 aa17.05■□□□□ 0.32
RHBDD3-201ENST00000216085 TGFBR2P37173 567 aa17.05■□□□□ 0.32
RHBDD3-201ENST00000216085 HAAOP46952 286 aa17.05■□□□□ 0.32
RHBDD3-201ENST00000216085 GP2P55259 537 aaKnown RBP17.05■□□□□ 0.32
RHBDD3-201ENST00000216085 MTCP1P56278 107 aa17.05■□□□□ 0.32
RHBDD3-201ENST00000216085 MPPED2Q15777 294 aa17.05■□□□□ 0.32
RHBDD3-201ENST00000216085 HSD17B12Q53GQ0 312 aa17.05■□□□□ 0.32
RHBDD3-201ENST00000216085 SPRNQ5BIV9 151 aa17.05■□□□□ 0.32
RHBDD3-201ENST00000216085 DMRTC1Q5HYR2 192 aa17.05■□□□□ 0.32
RHBDD3-201ENST00000216085 YIPF5Q969M3 257 aa17.05■□□□□ 0.32
RHBDD3-201ENST00000216085 TLNRD1Q9H1K6 362 aa17.05■□□□□ 0.32
RHBDD3-201ENST00000216085 TREM2Q9NZC2 230 aa17.05■□□□□ 0.32
RHBDD3-201ENST00000216085 SF3B6Q9Y3B4 125 aaKnown RBP17.05■□□□□ 0.32
RHBDD3-201ENST00000216085 A0A1W2PPK0 400 aa17.05■□□□□ 0.32
RHBDD3-201ENST00000216085 LYNX1G3V0Z9 82 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms