RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 A0A1W2PQF6 199 aa17.74■□□□□ 0.43
PPP1R3F-201ENST00000055335 DXOO77932 396 aaKnown RBP17.74■□□□□ 0.43
PPP1R3F-201ENST00000055335 PRF1P14222 555 aa17.74■□□□□ 0.43
PPP1R3F-201ENST00000055335 OPRM1P35372 400 aa17.74■□□□□ 0.43
PPP1R3F-201ENST00000055335 HIST2H3AQ71DI3 136 aa17.74■□□□□ 0.43
PPP1R3F-201ENST00000055335 FAM157AC9JC47 383 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 RER1O15258 196 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 PHLDA2Q53GA4 152 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 P4HA3Q7Z4N8 544 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 OR1J1Q8NGS3 322 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 SLC46A1Q96NT5 459 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 PRO1933Q9H354 126 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 IGKV1D-8A0A087WSZ0 117 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 FAM221AA4D161 298 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 RHPN2P1A8MT19 583 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 STMND1H3BQB6 276 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 AKT2P31751 481 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 RAP1AP62834 184 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 NHLH2Q02577 135 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 PYY3Q5JQD4 70 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 TMEM268Q5VZI3 342 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 BRICD5Q6PL45 260 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 C6orf201Q7Z4U5 140 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 OR56B1Q8NGI3 324 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 TGIF2Q9GZN2 237 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 EGLN1Q9GZT9 426 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 RAB5CP51148 216 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 MMP16P51512 607 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 CPEB2Q7Z5Q1 589 aaKnown RBP17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 LYPD6Q86Y78 171 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 SUMF2Q8NBJ7 301 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 C19orf12Q9NSK7 152 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 ZNF319Q9P2F9 582 aa17.73■□□□□ 0.43
PPP1R3F-201ENST00000055335 RRADP55042 308 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 HSF1Q00613 529 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 HAGHQ16775 308 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 C4orf17Q53FE4 359 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 SLC22A18ASQ8N1D0 253 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 DEFB119Q8N690 84 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 MRGPRX1Q96LB2 322 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 CDRT15L2A8MXV6 281 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 IGHV2-5P01817 119 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 GSTP1P09211 210 aaKnown RBP17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 MPZP25189 248 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 ZNF121P58317 390 aaPredicted RBP17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 MFAP5Q13361 173 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 VAX1Q5SQQ9 334 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 FAM180AQ6UWF9 173 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 SUMF1Q8NBK3 374 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 RNF133Q8WVZ7 376 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 PIGTQ969N2 578 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 OR5B2Q96R09 309 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 SHANK1Q9Y566 2161 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 MS4A18H0YCH9 400 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 TNFSF12O43508 249 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 RAMP1O60894 148 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 SCGNO76038 276 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 FBP1P09467 338 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 MS4A18Q3C1V0 323 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 IL23AQ9NPF7 189 aa17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 NXT1Q9UKK6 140 aaKnown RBP17.72■□□□□ 0.43
PPP1R3F-201ENST00000055335 BORCS7-ASMTA0A0B4J1R7 106 aa17.71■□□□□ 0.43
PPP1R3F-201ENST00000055335 HMGN3Q15651 99 aa17.71■□□□□ 0.43
PPP1R3F-201ENST00000055335 OGFOD3Q6PK18 319 aa17.71■□□□□ 0.43
PPP1R3F-201ENST00000055335 OPN5Q6U736 354 aa17.71■□□□□ 0.43
PPP1R3F-201ENST00000055335 BADQ92934 168 aa17.71■□□□□ 0.43
PPP1R3F-201ENST00000055335 A0A1B0GV90 55 aa17.71■□□□□ 0.43
PPP1R3F-201ENST00000055335 CXorf65A6NEN9 183 aa17.71■□□□□ 0.43
PPP1R3F-201ENST00000055335 ZNF850A8MQ14 1090 aa17.71■□□□□ 0.43
PPP1R3F-201ENST00000055335 F5H5K5 113 aa17.71■□□□□ 0.43
PPP1R3F-201ENST00000055335 TMEM225BP0DP42 221 aa17.71■□□□□ 0.43
PPP1R3F-201ENST00000055335 KLK2P20151 261 aa17.71■□□□□ 0.43
PPP1R3F-201ENST00000055335 CSNK1EP49674 416 aaKnown RBP17.71■□□□□ 0.43
PPP1R3F-201ENST00000055335 OR10S1Q8NGN2 331 aa17.71■□□□□ 0.43
PPP1R3F-201ENST00000055335 EMG1Q92979 244 aaKnown RBP17.71■□□□□ 0.43
PPP1R3F-201ENST00000055335 MEGF10Q96KG7 1140 aa17.71■□□□□ 0.43
PPP1R3F-201ENST00000055335 ABCA11PQ4W5N1 156 aa17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 GRINAQ7Z429 371 aa17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 C9orf40Q8IXQ3 194 aa17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 OR8B12Q8NGG6 310 aa17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 MR1Q95460 341 aa17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 PLEKHJ1Q9NW61 149 aa17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 NXPH3O95157 252 aa17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 IGLV3-21P80748 117 aaPredicted RBP17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 GFI1BQ5VTD9 330 aa17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 C20orf196Q8IYI0 205 aa17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 OR5AS1Q8N127 324 aa17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 ZFP62Q8NB50 900 aaPredicted RBP17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 SLC35B3Q9H1N7 401 aa17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 WFDC1Q9HC57 220 aa17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 URB1O60287 2271 aaKnown RBP17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 GNRH1P01148 92 aa17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 GUSBP08236 651 aa17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 TAGLN2P37802 199 aaKnown RBP17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 ZNF84P51523 738 aa17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 MEX3BQ6ZN04 569 aaKnown RBP17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 TMEM156Q8N614 296 aa17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 OR5L1Q8NGL2 311 aa17.7■□□□□ 0.42
PPP1R3F-201ENST00000055335 ASB10Q8WXI3 467 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms