RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 4921517D22RikQ8CET0 269 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Olfr307Q8VFN8 313 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 D730048I06RikQ9CQB8 106 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Stra6lQ9DBN1 621 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Cpn1Q9JJN5 457 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Gm21761J3QK00 171 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 P01808 119 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Tacr3P47937 452 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Btg2Q04211 158 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Reg2Q08731 173 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Sp9Q64HY3 484 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Upk3bQ80YF6 275 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 PirtQ8BFY0 135 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Olfr1501Q8VFQ3 315 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 RTRAFQ9CQE8 244 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Q9CYS6 286 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Adad2Q9D5P4 478 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Nubp2Q9R061 275 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Ybx2Q9Z2C8 360 aaKnown RBP10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Ankrd65F6YK91 380 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Btbd35f30J3QML3 498 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Btbd35f22J3QN64 498 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Tbx15O70306 602 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Entpd6Q3U0P5 455 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Olfr1113Q7TR54 326 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Sec24bQ80ZX0 1251 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Lrp12Q8BUJ9 858 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Hus1bQ8K572 276 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Zcchc10Q9CX48 178 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Hint2Q9D0S9 163 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Mmp24Q9R0S2 618 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Mmp17Q9R0S3 578 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Minpp1Q9Z2L6 481 aa10.68□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Rhox2bA2A447 191 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Ube2dnl2A2AFH2 155 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Tmem200cJ3QK46 637 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 PipP02816 146 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Hoxb5P09079 269 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Ccr2P51683 373 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 RalyQ64012 312 aaKnown RBP10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Pramel5Q7TPY4 500 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 TxnipQ8BG60 397 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Ankrd33Q8BXP5 385 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Olfr281Q8VET6 311 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Fam3bQ9D309 235 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 D17h6s53eQ9Z1R4 293 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 4933403O08RikF6UK53 379 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Abcd3P55096 659 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Il15raQ60819 263 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Foxb1Q64732 325 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Olfr598Q7TRR2 319 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Cdk3Q80YP0 303 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Galnt14Q8BVG5 550 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Znf593Q9DB42 134 aaKnown RBP10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Trav12n-2A0A075B626 113 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Mrgpra9A0A140T8U8 332 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Olfr1066A2AK62 313 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Foxk1P42128 719 aaKnown RBP10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Rab3cP62823 227 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Olfr479Q7TRV1 327 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Olfr429Q7TRW1 312 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Dleu7Q8CHZ8 209 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 PnpoQ91XF0 261 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 MrgprdQ91ZB8 321 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Uqcrc1Q9CZ13 480 aaKnown RBP10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Spint2Q9WU03 252 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Crybb1Q9WVJ5 250 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Zfp982A2A8Q4 368 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Rarres1F6ZIS7 283 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Gabrg3P27681 467 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Ctf2P83714 204 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 DraxinQ6PAL1 343 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Nhlrc2Q8BZW8 725 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Neurl2Q9D0S4 285 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Btbd35f16A0A087WSN2 498 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Zfp69A2A761 587 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 2010106E10RikA2ANY3 279 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 AI182371A2AS37 356 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 A6H6Q4 206 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Gm4177D3YTX5 305 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Vmn1r127K7N6J5 305 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Vmn1r142K7N6U0 305 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Vmn1r94K7N6X3 305 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Vmn1r115K7N6Y3 295 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Vmn1r159K7N701 305 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 P01637 128 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 NrasP08556 189 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Hist1h1cP15864 212 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Oprm1P42866 398 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Nat3P50296 290 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Kcng3P59053 433 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Eif4eP63073 217 aaKnown RBP10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Bex6Q3TZW7 114 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 FevQ8QZW2 237 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Tnfrsf12aQ9CR75 129 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Mgat4cQ9D306 478 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Riox1Q9JJF3 603 aa10.67□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Zfp995E9Q6M3 437 aa10.66□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Plscr5J3QM92 274 aa10.66□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Gm3633L7N233 213 aa10.66□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms