RNA–Protein interactions for RNA: ENST00000637699.1

CLN3-262, Transcript of CLN3, battenin, humanhuman

TSL 2

Gene CLN3, Length 1,228 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-262ENST00000637699 PAPOLGQ9BWT3 736 aaKnown RBP15.83■□□□□ 0.12
CLN3-262ENST00000637699 METTL8Q9H825 291 aaKnown RBP15.83■□□□□ 0.12
CLN3-262ENST00000637699 SLC25A10Q9UBX3 287 aaPredicted RBP15.83■□□□□ 0.12
CLN3-262ENST00000637699 RHBDD3Q9Y3P4 386 aa15.83■□□□□ 0.12
CLN3-262ENST00000637699 NKX6-3A6NJ46 265 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 SEMG1P04279 462 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 GYPBP06028 91 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 NDUFB7P17568 137 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 RRM2P31350 389 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 SLC15A1P46059 708 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 GSK3AP49840 483 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 DGUOKQ16854 277 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 OXLD1Q5BKU9 147 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 FAM57BQ71RH2 274 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 OR51G2Q8NGK0 314 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 OR2T6Q8NHC8 308 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 RPL3LQ92901 407 aaKnown RBP15.82■□□□□ 0.12
CLN3-262ENST00000637699 DUS3LQ96G46 650 aaKnown RBP15.82■□□□□ 0.12
CLN3-262ENST00000637699 MED30Q96HR3 178 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 GAFA1Q96PS6 74 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 RAB3IPQ96QF0 476 aaPredicted RBP15.82■□□□□ 0.12
CLN3-262ENST00000637699 MICU1Q9BPX6 476 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 FAM234AQ9H0X4 552 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 TLNRD1Q9H1K6 362 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 MAB21L2Q9Y586 359 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 CDH10Q9Y6N8 788 aa15.82■□□□□ 0.12
CLN3-262ENST00000637699 hCG_38984A0A1B0GV85 526 aa15.81■□□□□ 0.12
CLN3-262ENST00000637699 DHRS12A0PJE2 317 aa15.81■□□□□ 0.12
CLN3-262ENST00000637699 M0R1W7 72 aa15.81■□□□□ 0.12
CLN3-262ENST00000637699 DCTN3O75935 186 aa15.81■□□□□ 0.12
CLN3-262ENST00000637699 VSIG10L2P0DP72 767 aa15.81■□□□□ 0.12
CLN3-262ENST00000637699 PAX6P26367 422 aa15.81■□□□□ 0.12
CLN3-262ENST00000637699 HSD11B1P28845 292 aa15.81■□□□□ 0.12
CLN3-262ENST00000637699 GRB2P62993 217 aaKnown RBP15.81■□□□□ 0.12
CLN3-262ENST00000637699 BLMHQ13867 455 aa15.81■□□□□ 0.12
CLN3-262ENST00000637699 KLHL12Q53G59 568 aa15.81■□□□□ 0.12
CLN3-262ENST00000637699 SAMD4BQ5PRF9 694 aaKnown RBP15.81■□□□□ 0.12
CLN3-262ENST00000637699 C11orf88Q6PI97 169 aa15.81■□□□□ 0.12
CLN3-262ENST00000637699 ZNF788Q6ZQV5 615 aa15.81■□□□□ 0.12
CLN3-262ENST00000637699 PPP1R14AQ96A00 147 aa15.81■□□□□ 0.12
CLN3-262ENST00000637699 MCUR1Q96AQ8 359 aa15.81■□□□□ 0.12
CLN3-262ENST00000637699 CLPTM1LQ96KA5 538 aa15.81■□□□□ 0.12
CLN3-262ENST00000637699 DNTTIP1Q9H147 329 aa15.81■□□□□ 0.12
CLN3-262ENST00000637699 ELL3Q9HB65 397 aaPredicted RBP15.81■□□□□ 0.12
CLN3-262ENST00000637699 BRD7Q9NPI1 651 aa15.81■□□□□ 0.12
CLN3-262ENST00000637699 DNAJC27Q9NZQ0 273 aa15.81■□□□□ 0.12
CLN3-262ENST00000637699 SF3B6Q9Y3B4 125 aaKnown RBP15.81■□□□□ 0.12
CLN3-262ENST00000637699 ANXA2P2A6NMY6 339 aa15.8■□□□□ 0.12
CLN3-262ENST00000637699 H0YAE9 185 aa15.8■□□□□ 0.12
CLN3-262ENST00000637699 AKR7A2O43488 359 aa15.8■□□□□ 0.12
CLN3-262ENST00000637699 CLUP10909 449 aa15.8■□□□□ 0.12
CLN3-262ENST00000637699 IL5RAQ01344 420 aa15.8■□□□□ 0.12
CLN3-262ENST00000637699 CRMP1Q14194 572 aa15.8■□□□□ 0.12
CLN3-262ENST00000637699 EIF2B1Q14232 305 aaKnown RBP15.8■□□□□ 0.12
CLN3-262ENST00000637699 TEX30Q5JUR7 227 aa15.8■□□□□ 0.12
CLN3-262ENST00000637699 HCP5Q6MZN7 132 aa15.8■□□□□ 0.12
CLN3-262ENST00000637699 DEFB107AQ8IZN7 70 aa15.8■□□□□ 0.12
CLN3-262ENST00000637699 OR8D4Q8NGM9 314 aa15.8■□□□□ 0.12
CLN3-262ENST00000637699 OR6K6Q8NGW6 343 aa15.8■□□□□ 0.12
CLN3-262ENST00000637699 ANGPTL6Q8NI99 470 aa15.8■□□□□ 0.12
CLN3-262ENST00000637699 RTL8AQ9BWD3 113 aa15.8■□□□□ 0.12
CLN3-262ENST00000637699 SP140LQ9H930 580 aa15.8■□□□□ 0.12
CLN3-262ENST00000637699 ZNF319Q9P2F9 582 aa15.8■□□□□ 0.12
CLN3-262ENST00000637699 MAGEL2Q9UJ55 1249 aa15.8■□□□□ 0.12
CLN3-262ENST00000637699 ARPC2O15144 300 aa15.79■□□□□ 0.12
CLN3-262ENST00000637699 ANGPTL7O43827 346 aa15.79■□□□□ 0.12
CLN3-262ENST00000637699 FABP3P05413 133 aa15.79■□□□□ 0.12
CLN3-262ENST00000637699 SPI1P17947 270 aa15.79■□□□□ 0.12
CLN3-262ENST00000637699 CFL1P23528 166 aaKnown RBP15.79■□□□□ 0.12
CLN3-262ENST00000637699 GABRA2P47869 451 aa15.79■□□□□ 0.12
CLN3-262ENST00000637699 LOXL3P58215 753 aa15.79■□□□□ 0.12
CLN3-262ENST00000637699 ZNF121P58317 390 aaPredicted RBP15.79■□□□□ 0.12
CLN3-262ENST00000637699 MXRA7P84157 204 aa15.79■□□□□ 0.12
CLN3-262ENST00000637699 LRRC75BQ2VPJ9 315 aa15.79■□□□□ 0.12
CLN3-262ENST00000637699 NSUN5P1Q3KNT7 163 aa15.79■□□□□ 0.12
CLN3-262ENST00000637699 RPL13AP3Q6NVV1 102 aa15.79■□□□□ 0.12
CLN3-262ENST00000637699 KCTD8Q6ZWB6 473 aa15.79■□□□□ 0.12
CLN3-262ENST00000637699 PRSS45Q7RTY3 260 aa15.79■□□□□ 0.12
CLN3-262ENST00000637699 CSNK2A3Q8NEV1 391 aa15.79■□□□□ 0.12
CLN3-262ENST00000637699 OR9Q2Q8NGE9 314 aa15.79■□□□□ 0.12
CLN3-262ENST00000637699 OR10Z1Q8NGY1 313 aa15.79■□□□□ 0.12
CLN3-262ENST00000637699 SGCDQ92629 289 aa15.79■□□□□ 0.12
CLN3-262ENST00000637699 AJUBAQ96IF1 538 aa15.79■□□□□ 0.12
CLN3-262ENST00000637699 KMT2CQ8NEZ4 4911 aaKnown RBP15.79■□□□□ 0.12
CLN3-262ENST00000637699 DNAH3Q8TD57 4116 aa15.79■□□□□ 0.12
CLN3-262ENST00000637699 ZNF850A8MQ14 1090 aa15.78■□□□□ 0.12
CLN3-262ENST00000637699 SIGLEC5O15389 551 aa15.78■□□□□ 0.12
CLN3-262ENST00000637699 ACAA1P09110 424 aaPredicted RBP15.78■□□□□ 0.12
CLN3-262ENST00000637699 CAV3P56539 151 aa15.78■□□□□ 0.12
CLN3-262ENST00000637699 PRDX4Q13162 271 aa15.78■□□□□ 0.12
CLN3-262ENST00000637699 CRIP3Q6Q6R5 217 aa15.78■□□□□ 0.12
CLN3-262ENST00000637699 OR52H1Q8NGJ2 320 aa15.78■□□□□ 0.12
CLN3-262ENST00000637699 OR5D13Q8NGL4 314 aa15.78■□□□□ 0.12
CLN3-262ENST00000637699 PGAM5Q96HS1 289 aa15.78■□□□□ 0.12
CLN3-262ENST00000637699 NSMCE2Q96MF7 247 aa15.78■□□□□ 0.12
CLN3-262ENST00000637699 NKX3-1Q99801 234 aaPredicted RBP15.78■□□□□ 0.12
CLN3-262ENST00000637699 ABHD6Q9BV23 337 aa15.78■□□□□ 0.12
CLN3-262ENST00000637699 MEGF9Q9H1U4 602 aa15.78■□□□□ 0.12
CLN3-262ENST00000637699 OR10A2Q9H208 303 aa15.78■□□□□ 0.12
CLN3-262ENST00000637699 RANBP3Q9H6Z4 567 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms