RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 ARV1Q9H2C2 271 aa13.79□□□□□ -0.2
CACNA1A-235ENST00000637004 SUSD2Q9UGT4 822 aa13.79□□□□□ -0.2
CACNA1A-235ENST00000637004 MRPS28Q9Y2Q9 187 aaKnown RBP13.79□□□□□ -0.2
CACNA1A-235ENST00000637004 LOC101059948A0A1B0GTJ6 334 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 SOCS1O15524 211 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 IFNA21P01568 189 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 ZNF239Q16600 458 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 ZNF529Q6P280 563 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 ZNF248Q8NDW4 579 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 ADOQ96SZ5 270 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 TMEM59Q9BXS4 323 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 FAM60AQ9NP50 221 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 PARPBPQ9NWS1 579 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 FAM206AQ9NX38 181 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 STRAPQ9Y3F4 350 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 A0A0A6YYD4 124 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 A6NIZ1 184 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 PLPP3O14495 311 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 YIF1AO95070 293 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 TTRP02766 147 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 CLPSP04118 112 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 APODP05090 189 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 KLK3P07288 261 aaPredicted RBP13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 PGCP20142 388 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 ITGA3P26006 1051 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 RPS10P46783 165 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 RAP1BP61224 184 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 RUNX3Q13761 415 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 PPP1R3BQ86XI6 285 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 RNF133Q8WVZ7 376 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 TMEM68Q96MH6 324 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 CHST5Q9GZS9 411 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 TUBD1Q9UJT1 453 aa13.78□□□□□ -0.2
CACNA1A-235ENST00000637004 A8MVM7 634 aa13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 CDC14BO60729 498 aa13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 CTSBP07858 339 aa13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 ZNF20P17024 532 aa13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 CHATP28329 748 aa13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 GALNSP34059 522 aa13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 SLC26A5P58743 744 aa13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 BPIFB3P59826 476 aa13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 PNLDC1Q8NA58 520 aaKnown RBP13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 SMRP1Q8NCR6 262 aa13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 LFNGQ8NES3 379 aa13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 MAFIPQ8WZ33 124 aa13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 URM1Q9BTM9 101 aaKnown RBP13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 NXF5Q9H1B4 397 aaKnown RBP13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 SMDT1Q9H4I9 107 aa13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 C19orf12Q9NSK7 152 aa13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 GFOD1Q9NXC2 390 aa13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 EHFQ9NZC4 300 aa13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 HDGFL3Q9Y3E1 203 aa13.77□□□□□ -0.2
CACNA1A-235ENST00000637004 PRH1P02810 166 aa13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 CSNK2A1P68400 391 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 SLC35A1P78382 337 aa13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 CLINT1Q14677 625 aa13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 ZNF383Q8NA42 475 aa13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 TMEM104Q8NE00 496 aa13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 CSNK2A3Q8NEV1 391 aa13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 CDCA3Q99618 268 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 RPP25Q9BUL9 199 aaKnown RBP13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 PBOV1Q9GZY1 135 aa13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 C17orf105B2RV13 164 aa13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 KNG1P01042 644 aa13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 POU2F2P09086 479 aa13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 RPS23P62266 143 aaKnown RBP13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 PRTGQ2VWP7 1150 aa13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 AKR7LQ8NHP1 331 aa13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 SLAMF9Q96A28 289 aa13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 FAM131CQ96AQ9 280 aa13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 ST6GALNAC5Q9BVH7 336 aa13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 CD207Q9UJ71 328 aa13.77□□□□□ -0.21
CACNA1A-235ENST00000637004 H0Y8X5 98 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 STMND1H3BQB6 276 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 SDCBPO00560 298 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 TNFRSF10CO14798 259 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 NPIPB7O75200 414 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 RAD51DO75771 328 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 ECI1P42126 302 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 POLR2HP52434 150 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 SNU13P55769 128 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 TMEM50BP56557 158 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 C14orf28Q4W4Y0 310 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 SOHLH1Q5JUK2 328 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 ARMC6Q6NXE6 501 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 PATE1Q8WXA2 126 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 ARHGAP5-AS1Q96IT6 56 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 YPEL4Q96NS1 127 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 SLC46A1Q96NT5 459 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 GNRHR2Q96P88 292 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 LSM5Q9Y4Y9 91 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 TMED7-TICAM2A0A0A6YYA0 188 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 AHSA1O95433 338 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 FCARP24071 287 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 PPP1CAP62136 330 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 FOXK1P85037 733 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 GTF3AQ92664 365 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 GINS3Q9BRX5 216 aa13.76□□□□□ -0.21
CACNA1A-235ENST00000637004 SLC2A4RGQ9NR83 387 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms