RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 GUCA1AP43080 201 aaPredicted RBP6.57□□□□□ -1.36
CLK1-215ENST00000621181 WNT4P56705 351 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 RPS25P62851 125 aaKnown RBP6.57□□□□□ -1.36
CLK1-215ENST00000621181 PSG4Q00888 419 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 ACSM1Q08AH1 577 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 ASAH1Q13510 395 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 ZMYND11Q15326 602 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 KLHL22Q53GT1 634 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 C10orf128Q5T292 105 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 ARL9Q6T311 187 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 LRRC28Q86X40 367 aaPredicted RBP6.57□□□□□ -1.36
CLK1-215ENST00000621181 KIR3DL3Q8N743 410 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 ZNF283Q8N7M2 679 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 PLPP7Q8NBV4 271 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 OR4Q3Q8NH05 313 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 OR4F5Q8NH21 305 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 GNPDA2Q8TDQ7 276 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 ASB10Q8WXI3 467 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 RNFT2Q96EX2 444 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 ZNF486Q96H40 463 aaPredicted RBP6.57□□□□□ -1.36
CLK1-215ENST00000621181 ST6GAL2Q96JF0 529 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 SAMD8Q96LT4 415 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 SSBP3Q9BWW4 388 aaPredicted RBP6.57□□□□□ -1.36
CLK1-215ENST00000621181 EGLN3Q9H6Z9 239 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 BEX1Q9HBH7 125 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 TMEM165Q9HC07 324 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 EXOSC4Q9NPD3 245 aaKnown RBP6.57□□□□□ -1.36
CLK1-215ENST00000621181 TNFRSF19Q9NS68 423 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 IL20RAQ9UHF4 553 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 SSR3Q9UNL2 185 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 EXOGQ9Y2C4 368 aaKnown RBP6.57□□□□□ -1.36
CLK1-215ENST00000621181 MMP24Q9Y5R2 645 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 MDFIC2A0A1B0GVS7 189 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 TRDV1A0A1B0GX56 115 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 A0A1W2PQ09 198 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 IRGMA1A4Y4 181 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 M0QZ24 198 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 MYL12BO14950 172 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 LYPD3O95274 346 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 ABHD16AO95870 558 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 LALBAP00709 142 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 IGHA1P01876 353 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 HLA-DQB1P01920 261 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 APOA1P02647 267 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 TRAPPC2P0DI81 140 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 TRAPPC2BP0DI82 140 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 PPIAL4GP0DN37 164 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 FPR3P25089 353 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 CD80P33681 288 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 MDH2P40926 338 aaKnown RBP6.56□□□□□ -1.36
CLK1-215ENST00000621181 SLC9A3P48764 834 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 GNB2P62879 340 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 FABP5Q01469 135 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 PAX8Q06710 450 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 FMODQ06828 376 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 PSG7Q13046 419 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 TRAM2Q15035 370 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 SNAPC1Q16533 368 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 OR2G6Q5TZ20 316 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 SLC27A4Q6P1M0 643 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 LRRN1Q6UXK5 716 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 ZNF730Q6ZMV8 503 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 C9orf139Q6ZV77 190 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 RDH10Q8IZV5 341 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 MUC20Q8N307 709 aaPredicted RBP6.56□□□□□ -1.36
CLK1-215ENST00000621181 NABP1Q96AH0 204 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 C4orf45Q96LM5 186 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 ZNF426Q9BUY5 554 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 OR2H1Q9GZK4 316 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 PPP1R3EQ9H7J1 279 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 ABCB9Q9NP78 766 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 IL20Q9NYY1 176 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 KLHL21Q9UJP4 597 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 EXOSC1Q9Y3B2 195 aaKnown RBP6.56□□□□□ -1.36
CLK1-215ENST00000621181 N6AMT1Q9Y5N5 214 aa6.56□□□□□ -1.36
CLK1-215ENST00000621181 SOX21Q9Y651 276 aaPredicted RBP6.56□□□□□ -1.36
CLK1-215ENST00000621181 SHISA3A0PJX4 238 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 CEACAM18A8MTB9 384 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 TIMM23O14925 209 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 SURF4O15260 269 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 PLA2G10O15496 165 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 PLATP00750 562 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 RPS2P15880 293 aaKnown RBP6.55□□□□□ -1.36
CLK1-215ENST00000621181 GABRA5P31644 462 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 SDC2P34741 201 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 DDOSTP39656 456 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 AQP2P41181 271 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 NKX2-5P52952 324 aaPredicted RBP6.55□□□□□ -1.36
CLK1-215ENST00000621181 RAG2P55895 527 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 PCBD1P61457 104 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 ATAD3CQ5T2N8 411 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 FAM27BQ5VT28 67 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 C22orf42Q6IC83 251 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 FIP1L1Q6UN15 594 aaKnown RBP6.55□□□□□ -1.36
CLK1-215ENST00000621181 BRD3OSQ6XYD6 125 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 NKAIN4Q8IVV8 208 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 GDPD1Q8N9F7 314 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 OR9Q1Q8NGQ5 310 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 ITLN1Q8WWA0 313 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 ACOT11Q8WXI4 607 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms