RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 HPSE2Q8WWQ2 592 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 ST8SIA4Q92187 359 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 TBX15Q96SF7 602 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 PKP2Q99959 881 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 RTL8AQ9BWD3 113 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 NIPAL2Q9H841 368 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 KRT84Q9NSB2 600 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 FAM206AQ9NX38 181 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 KAAG1Q9UBP8 84 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 NBEAL1Q6ZS30 2694 aa14.21□□□□□ -0.13
HMGN3-203ENST00000620514 TOX4O94842 621 aa14.2□□□□□ -0.14
HMGN3-203ENST00000620514 TFF1P04155 84 aa14.2□□□□□ -0.14
HMGN3-203ENST00000620514 RNASE1P07998 156 aaKnown RBP14.2□□□□□ -0.14
HMGN3-203ENST00000620514 MUC1P15941 1255 aaPredicted RBP14.2□□□□□ -0.14
HMGN3-203ENST00000620514 AMY2BP19961 511 aa14.2□□□□□ -0.14
HMGN3-203ENST00000620514 ESRRGP62508 458 aa14.2□□□□□ -0.14
HMGN3-203ENST00000620514 SNCBQ16143 134 aa14.2□□□□□ -0.14
HMGN3-203ENST00000620514 GPR157Q5UAW9 335 aa14.2□□□□□ -0.14
HMGN3-203ENST00000620514 LCN1P1Q5VSP4 162 aa14.2□□□□□ -0.14
HMGN3-203ENST00000620514 FTMTQ8N4E7 242 aa14.2□□□□□ -0.14
HMGN3-203ENST00000620514 FAM216BQ8N7L0 139 aa14.2□□□□□ -0.14
HMGN3-203ENST00000620514 OR5T2Q8NGG2 359 aa14.2□□□□□ -0.14
HMGN3-203ENST00000620514 PPP1R14AQ96A00 147 aa14.2□□□□□ -0.14
HMGN3-203ENST00000620514 RNF170Q96K19 258 aa14.2□□□□□ -0.14
HMGN3-203ENST00000620514 OR8B4Q96RC9 309 aa14.2□□□□□ -0.14
HMGN3-203ENST00000620514 WDR13Q9H1Z4 485 aa14.2□□□□□ -0.14
HMGN3-203ENST00000620514 TMEM269A0A1B0GVZ9 245 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 SRRM5B3KS81 715 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 G3V2T6 193 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 P2RY10O00398 339 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 LIPFP07098 398 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 ARF6P62330 175 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 MFGE8Q08431 387 aaPredicted RBP14.19□□□□□ -0.14
HMGN3-203ENST00000620514 DMRTC1Q5HYR2 192 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 SLX4IPQ5VYV7 408 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 KCTD18Q6PI47 426 aaPredicted RBP14.19□□□□□ -0.14
HMGN3-203ENST00000620514 DEGS2Q6QHC5 323 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 KCTD8Q6ZWB6 473 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 MEPCEQ7L2J0 689 aaKnown RBP14.19□□□□□ -0.14
HMGN3-203ENST00000620514 ZDHHC23Q8IYP9 409 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 TCEANCQ8N8B7 351 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 PNLDC1Q8NA58 520 aaKnown RBP14.19□□□□□ -0.14
HMGN3-203ENST00000620514 SCCPDHQ8NBX0 429 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 FAM81AQ8TBF8 368 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 WDFY2Q96P53 400 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 MROQ9BYG7 248 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 PBOV1Q9GZY1 135 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 SIRPDQ9H106 197 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 ZMAT3Q9HA38 289 aaKnown RBP14.19□□□□□ -0.14
HMGN3-203ENST00000620514 SNTG1Q9NSN8 517 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 ZNF391Q9UJN7 358 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 PCDHGB1Q9Y5G3 927 aa14.19□□□□□ -0.14
HMGN3-203ENST00000620514 CENPVL3A0A0U1RRI6 287 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 TMEM210A6NLX4 147 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 ZAR1LA6NP61 321 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 CLDN34H7C241 214 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 MAGEB4O15481 346 aaPredicted RBP14.18□□□□□ -0.14
HMGN3-203ENST00000620514 AKR7A2O43488 359 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 SELLP14151 372 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 FASP25445 335 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 DCTDP32321 178 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 EFNB1P98172 346 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 ROM1Q03395 351 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 IKZF1Q13422 519 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 FAM76BQ5HYJ3 339 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 CEP78Q5JTW2 689 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 AADACL4Q5VUY2 407 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 C1orf146Q5VVC0 180 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 METTL11BQ5VVY1 283 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 C12orf73Q69YU5 71 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 STUMQ69YW2 141 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 KDM4DQ6B0I6 523 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 ZNF679Q8IYX0 411 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 OR10Z1Q8NGY1 313 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 OR51E1Q8TCB6 317 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 LRTOMTQ8WZ04 291 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 ZDHHC16Q969W1 377 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 SLC25A28Q96A46 364 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 FAM71F1Q96KD3 344 aaPredicted RBP14.18□□□□□ -0.14
HMGN3-203ENST00000620514 CNN2Q99439 309 aaKnown RBP14.18□□□□□ -0.14
HMGN3-203ENST00000620514 GABARAPL1Q9H0R8 117 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 ABCB9Q9NP78 766 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 HAO2Q9NYQ3 351 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 RPUSD1Q9UJJ7 312 aaKnown RBP14.18□□□□□ -0.14
HMGN3-203ENST00000620514 IKZF2Q9UKS7 526 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 AP4S1Q9Y587 144 aa14.18□□□□□ -0.14
HMGN3-203ENST00000620514 A0A0U1RQV5 110 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 ZNF816-ZNF321PA0A0X1KG74 233 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 ACOD1A6NK06 481 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 HOXA3O43365 443 aaPredicted RBP14.17□□□□□ -0.14
HMGN3-203ENST00000620514 ZNF254O75437 659 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 ECDO95905 644 aaPredicted RBP14.17□□□□□ -0.14
HMGN3-203ENST00000620514 IGLV3-1P01715 115 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 MAP2K3P46734 347 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 RASSF2P50749 326 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 GPM6AP51674 278 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 RIDAP52758 137 aaKnown RBP14.17□□□□□ -0.14
HMGN3-203ENST00000620514 FOXL1Q12952 345 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 KRT74Q7RTS7 529 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 COMMD2Q86X83 199 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms