RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CASRP41180 1078 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 FOXG1P55316 489 aaPredicted RBP10.86□□□□□ -0.67
CIITA-212ENST00000618207 ARFRP1Q13795 201 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 PLAC9Q5JTB6 97 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 PGAP1Q75T13 922 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 SLC16A14Q7RTX9 510 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 ARMC10Q8N2F6 343 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 OR51T1Q8NGJ9 327 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 FNDC9Q8TBE3 224 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 AQP3Q92482 292 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 ARHGAP5-AS1Q96IT6 56 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 ZNF230Q9UIE0 474 aaPredicted RBP10.86□□□□□ -0.67
CIITA-212ENST00000618207 TMEM14DPA8MWL7 114 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 CCSO14618 274 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 SRSF6Q13247 344 aaKnown RBP10.85□□□□□ -0.67
CIITA-212ENST00000618207 FAM209BQ5JX69 171 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 TSPO2Q5TGU0 170 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 FAM27BQ5VT28 67 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 RAB12Q6IQ22 244 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 RHOUQ7L0Q8 258 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 TMPRSS7Q7RTY8 843 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 TMEM229BQ8NBD8 167 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 SPTSSAQ969W0 71 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 RAB3CQ96E17 227 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 ELMOD3Q96FG2 381 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 PRRG4Q9BZD6 226 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 PFDN2Q9UHV9 154 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 FXYD6-FXYD2A0A087WZ82 144 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 DHRS3O75911 302 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 SLC22A5O76082 557 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 OR4E1P0C645 316 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 CD37P11049 281 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 RAB6AP20340 208 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 GFRA1P56159 465 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 TMEM50BP56557 158 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 MRPS34P82930 218 aaKnown RBP10.85□□□□□ -0.67
CIITA-212ENST00000618207 GRK1Q15835 563 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 ZNF528Q3MIS6 628 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 Q3ZCU0 254 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 LRRC37A5PQ49AS3 106 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 ZNF529Q6P280 563 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 OR13C8Q8NGS7 320 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 CASTOR1Q8WTX7 329 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 NTNG2Q96CW9 530 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 ADGRG7Q96K78 797 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 C1orf147Q96MC9 270 aaPredicted RBP10.85□□□□□ -0.67
CIITA-212ENST00000618207 S100A13Q99584 98 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 ST6GALNAC5Q9BVH7 336 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 FXYD6Q9H0Q3 95 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 TMEM38BQ9NVV0 291 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 ARGFXA6NJG6 315 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 ARPC5O15511 151 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 SPRY1O43609 319 aaPredicted RBP10.85□□□□□ -0.67
CIITA-212ENST00000618207 RAD51DO75771 328 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 VAMP1P23763 118 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 PSG4Q00888 419 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 RELQ04864 619 aaPredicted RBP10.85□□□□□ -0.67
CIITA-212ENST00000618207 ATPAF1Q5TC12 328 aaPredicted RBP10.85□□□□□ -0.67
CIITA-212ENST00000618207 CDH24Q86UP0 819 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 SKA3Q8IX90 412 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 TUSC5Q8IXB3 177 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 PNLDC1Q8NA58 520 aaKnown RBP10.85□□□□□ -0.67
CIITA-212ENST00000618207 OR2AK2Q8NG84 335 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 RADILQ96JH8 1075 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 SF3B5Q9BWJ5 86 aaKnown RBP10.85□□□□□ -0.67
CIITA-212ENST00000618207 TTTY12Q9BZ98 90 aa10.85□□□□□ -0.67
CIITA-212ENST00000618207 LINC01387J3KSC0 135 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 SULT1C2O00338 296 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 SSX5O60225 188 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 MRPL33O75394 65 aaKnown RBP10.84□□□□□ -0.67
CIITA-212ENST00000618207 IFNA6P05013 189 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 IL5P05113 134 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 ZNF735P0CB33 412 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 TMEM225BP0DP42 221 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 AKR1C4P17516 323 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 PI3P19957 117 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 GABRR1P24046 479 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 PTGFRP43088 359 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 NKAPLQ5M9Q1 402 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 VASH2Q86V25 355 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.84□□□□□ -0.67
CIITA-212ENST00000618207 KCNG3Q8TAE7 436 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 MARC2Q969Z3 335 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 REEP6Q96HR9 211 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 SEC22AQ96IW7 307 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 FAM173AQ9BQD7 235 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 DEFB127Q9H1M4 99 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 ZNF703Q9H7S9 590 aaPredicted RBP10.84□□□□□ -0.67
CIITA-212ENST00000618207 VSIG4Q9Y279 399 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 NOP16Q9Y3C1 178 aaKnown RBP10.84□□□□□ -0.67
CIITA-212ENST00000618207 MGAQ8IWI9 3026 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 SPAARA0A1B0GVQ0 90 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 SDCBPO00560 298 aaPredicted RBP10.84□□□□□ -0.67
CIITA-212ENST00000618207 ST8SIA5O15466 376 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 MPC2O95563 127 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 CFDP00746 253 aaPredicted RBP10.84□□□□□ -0.67
CIITA-212ENST00000618207 HLA-AP01891 365 aaKnown RBP10.84□□□□□ -0.67
CIITA-212ENST00000618207 PER3P56645 1201 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 BPIFB3P59826 476 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 PDCD1Q15116 288 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms