RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 CDC6Q99741 560 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 ABHD6Q9BV23 337 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 GDE1Q9NZC3 331 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 THEGLP0DJG4 465 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 AKT2P31751 481 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 RBMXP38159 391 aaKnown RBP11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 ARL4DP49703 201 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 TAS2R60P59551 318 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 RPS23P62266 143 aaKnown RBP11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 ZNF385CQ66K41 422 aaPredicted RBP11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 TMEM92Q6UXU6 159 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 TMEM182Q6ZP80 229 aaPredicted RBP11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 OR5H2Q8NGV7 314 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 C2orf50Q96LR7 162 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 PRDM13Q9H4Q3 707 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 MRPL22Q9NWU5 206 aaKnown RBP11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 LRP12Q9Y561 859 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 TGIF2-C20orf24A0A0A6YYL0 155 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 A0A1W2PP11 408 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 CST4P01036 141 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 IL2RAP01589 272 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 OMGP23515 440 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 CSNK2A1P68400 391 aaPredicted RBP11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 ZNF117Q03924 483 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 HMGN3Q15651 99 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 SP6Q3SY56 376 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 KHDC3LQ587J8 217 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 ATG4DQ86TL0 474 aaPredicted RBP11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 CSNK2A3Q8NEV1 391 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 ERGIC1Q969X5 290 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 RBM14Q96PK6 669 aaKnown RBP11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 MESP1Q9BRJ9 268 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 SH3BGRL3Q9H299 93 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 HIF3AQ9Y2N7 669 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 ZNF878C9JN71 531 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 ZNF587BE7ETH6 402 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 FOXS1O43638 330 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 SOD3P08294 240 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 PPP1CCP36873 323 aaKnown RBP11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 OR8G1Q15617 311 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 ZNF260Q3ZCT1 412 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 KCTD18Q6PI47 426 aaPredicted RBP11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 REC114Q7Z4M0 266 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 LRP11Q86VZ4 500 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 SLC22A18ASQ8N1D0 253 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 OR8B4Q96RC9 309 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 ZNF701Q9NV72 531 aaPredicted RBP11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 EHFQ9NZC4 300 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 DNAJB11Q9UBS4 358 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 MEMO1Q9Y316 297 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 PRRC2CQ9Y520 2896 aaKnown RBP11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 SCAF4O95104 1147 aaKnown RBP11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 MELTFP08582 738 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 HKR1P10072 659 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 PNMTP11086 282 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 HIST1H1BP16401 226 aaKnown RBP11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 GPR3P46089 330 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 REEP6Q96HR9 211 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 PARP11Q9NR21 331 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 DCAF16Q9NXF7 216 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 LUZP4Q9P127 313 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 RAB22AQ9UL26 194 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 CA14Q9ULX7 337 aa11.9□□□□□ -0.5
PCDHA11-202ENST00000616325 MAP1BP46821 2468 aaKnown RBP11.9□□□□□ -0.51
PCDHA11-202ENST00000616325 WIPF3A6NGB9 483 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 SOCS1O15524 211 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 HEXBP07686 556 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 SNCAP37840 140 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 SRSF4Q08170 494 aaKnown RBP11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 PLCXD2Q0VAA5 305 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 NSDHLQ15738 373 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 ZNF141Q15928 474 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 CLEC12BQ2HXU8 276 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 LINC00114Q6XXX2 140 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 RNF144BQ7Z419 303 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 PEG10Q86TG7 708 aaKnown RBP11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 SLC35B3Q9H1N7 401 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 JTBO76095 146 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 AHSA1O95433 338 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 SFT2D2O95562 160 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 HLA-GP17693 338 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 CHATP28329 748 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 SCAND1P57086 179 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 TAS2R31P59538 309 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 EGR3Q06889 387 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 TCTN2Q96GX1 697 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 SMCO3A2RU48 225 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 CDRT15L2A8MXV6 281 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 TNFSF14O43557 240 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 TMEM127O75204 238 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 CXCL1P09341 107 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 LSM6P62312 80 aaKnown RBP11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 POU3F1Q03052 451 aaPredicted RBP11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 PNLIPRP3Q17RR3 467 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 RSPO4Q2I0M5 234 aaPredicted RBP11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 PLXDC2Q6UX71 529 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 TOMM40LQ969M1 308 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 AQP10Q96PS8 301 aa11.89□□□□□ -0.51
PCDHA11-202ENST00000616325 LMF2Q9BU23 707 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms