RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 EFSO43281 561 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 ZNF43P17038 809 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 CDAP32320 146 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 TAF13Q15543 124 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 ACER2Q5QJU3 275 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 ACOT7LQ6ZUV0 252 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 NAA40Q86UY6 237 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 HOGA1Q86XE5 327 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 ZNF101Q8IZC7 436 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 NICN1Q9BSH3 213 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 ANGPTL4Q9BY76 406 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 GPR84Q9NQS5 396 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 IL17BQ9UHF5 180 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 GLS2Q9UI32 602 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 ATP6V1G2-DDX39BF2Z307 99 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 TERTO14746 1132 aaKnown RBP12.92□□□□□ -0.34
CDH1-213ENST00000612417 OPN1LWP04000 364 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 IFNA6P05013 189 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 NR2C1P13056 603 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 ABOP16442 354 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 CTSSP25774 331 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 PRKXP51817 358 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 TAS2R31P59538 309 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 GRB2P62993 217 aaKnown RBP12.92□□□□□ -0.34
CDH1-213ENST00000612417 ACTBL2Q562R1 376 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 IGSF11Q5DX21 431 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 VAX1Q5SQQ9 334 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 GLIPR1L1Q6UWM5 242 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 DOK3Q7L591 496 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 PAQR8Q8TEZ7 354 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 ST8SIA4Q92187 359 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 FBXW5Q969U6 566 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 WDR13Q9H1Z4 485 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 FN3KRPQ9HA64 309 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 ZNF319Q9P2F9 582 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 PCSK5Q92824 1860 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 CCSO14618 274 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 RER1O15258 196 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 CDC14BO60729 498 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 QDPRP09417 244 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 LIPCP11150 499 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 HIST1H1DP16402 221 aaKnown RBP12.92□□□□□ -0.34
CDH1-213ENST00000612417 CX3CR1P49238 355 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 SLC35A1P78382 337 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 PNLIPRP3Q17RR3 467 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 PLAC9Q5JTB6 97 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 MOB3CQ70IA8 216 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 ARMC10Q8N2F6 343 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 ARRDC1Q8N5I2 433 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 TMEM104Q8NE00 496 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 PXT1Q8NFP0 134 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 OR4K15Q8NH41 348 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 SGCZQ96LD1 299 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 GNRHR2Q96P88 292 aa12.92□□□□□ -0.34
CDH1-213ENST00000612417 RAMP1O60894 148 aa12.91□□□□□ -0.34
CDH1-213ENST00000612417 IGLV3-1P01715 115 aa12.91□□□□□ -0.34
CDH1-213ENST00000612417 P04436 131 aa12.91□□□□□ -0.34
CDH1-213ENST00000612417 ATP1B3P54709 279 aa12.91□□□□□ -0.34
CDH1-213ENST00000612417 LSM6P62312 80 aaKnown RBP12.91□□□□□ -0.34
CDH1-213ENST00000612417 PXDC1Q5TGL8 231 aa12.91□□□□□ -0.34
CDH1-213ENST00000612417 CARD17Q5XLA6 110 aa12.91□□□□□ -0.34
CDH1-213ENST00000612417 H3F3CQ6NXT2 135 aa12.91□□□□□ -0.34
CDH1-213ENST00000612417 RNF144BQ7Z419 303 aa12.91□□□□□ -0.34
CDH1-213ENST00000612417 COMMD2Q86X83 199 aa12.91□□□□□ -0.34
CDH1-213ENST00000612417 ADAD2Q8NCV1 583 aaKnown RBP12.91□□□□□ -0.34
CDH1-213ENST00000612417 RAB3CQ96E17 227 aa12.91□□□□□ -0.34
CDH1-213ENST00000612417 VRK1Q99986 396 aaPredicted RBP12.91□□□□□ -0.34
CDH1-213ENST00000612417 SOX7Q9BT81 388 aa12.91□□□□□ -0.34
CDH1-213ENST00000612417 TMEM59Q9BXS4 323 aa12.91□□□□□ -0.34
CDH1-213ENST00000612417 KIAA1549Q9HCM3 1950 aa12.91□□□□□ -0.34
CDH1-213ENST00000612417 LOC100509620A0A075B734 347 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 A0A087WZY1 265 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 ZNF726A6NNF4 738 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 TLX3O43711 291 aaPredicted RBP12.9□□□□□ -0.34
CDH1-213ENST00000612417 MPIG6BO95866 241 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 F10P00742 488 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 SLC2A1P11166 492 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 ALDH3B1P43353 468 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 OR3A4PP47883 348 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 H3F3AP84243 136 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 MICBQ29980 383 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 TMEM176BQ3YBM2 270 aaPredicted RBP12.9□□□□□ -0.34
CDH1-213ENST00000612417 RTN4RL2Q86UN3 420 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 TERB2Q8NHR7 220 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 SEC22AQ96IW7 307 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 SPACA5Q96QH8 159 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 OCSTAMPQ9BR26 566 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 BARX1Q9HBU1 254 aaPredicted RBP12.9□□□□□ -0.34
CDH1-213ENST00000612417 PROK2Q9HC23 129 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 SH2D2AQ9NP31 389 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.9□□□□□ -0.34
CDH1-213ENST00000612417 COQ3Q9NZJ6 369 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 GPR160Q9UJ42 338 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 MED13Q9UHV7 2174 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 CUL9Q8IWT3 2517 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 SULT2B1O00204 365 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 MFNGO00587 321 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 PMP2P02689 132 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 ANOS1P23352 680 aa12.9□□□□□ -0.34
CDH1-213ENST00000612417 SFTPDP35247 375 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms