RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 MAGT1Q9H0U3 335 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 LDAHQ9H6V9 325 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 SMCO4Q9NRQ5 59 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 TNFSF18Q9UNG2 199 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 REV3LO60673 3130 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 OR6C76A6NM76 312 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 RAB27BO00194 218 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 TO15178 435 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 SERPINE2P07093 398 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 ZNF44P15621 663 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 TBPP20226 339 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 GDF1P27539 372 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 EIF1P41567 113 aaKnown RBP6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 PTGFRP43088 359 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 RSPO4Q2I0M5 234 aaPredicted RBP6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 ZNF674Q2M3X9 581 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 SOHLH1Q5JUK2 328 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 LYSMD4Q5XG99 296 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 DEGS2Q6QHC5 323 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 SLC22A25Q6T423 547 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 SYT13Q7L8C5 426 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 OR51F2Q8NH61 342 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 RTN4IP1Q8WWV3 396 aaPredicted RBP6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 EDAQ92838 391 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 S100PBPQ96BU1 408 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 UQCC2Q9BRT2 126 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 FAAP24Q9BTP7 215 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 LANCL2Q9NS86 450 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 WDR87Q6ZQQ6 2873 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 SPTBN2O15020 2390 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 DXOO77932 396 aaKnown RBP6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 TK1P04183 234 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 GP1BAP07359 652 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 B4GALT1P15291 398 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 TMEM182Q6ZP80 229 aaPredicted RBP6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 RPS19BP1Q86WX3 136 aaKnown RBP6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 MAML2Q8IZL2 1156 aaPredicted RBP6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 GLYATL2Q8WU03 294 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 MITD1Q8WV92 249 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 ZNF285Q96NJ3 590 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 C12orf10Q9HB07 376 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 FSCN3Q9NQT6 498 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 CLEC1BQ9P126 229 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 KCNMB2Q9Y691 235 aa6.09□□□□□ -1.43
SYNPO2-206ENST00000610556 HEATR5AQ86XA9 2040 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 RNASEK-C17orf49H0YIS7 233 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 TRIM77I1YAP6 450 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 ADAM10O14672 748 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 DHHO43323 396 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 SFT2D2O95562 160 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 RD3LP0DJH9 198 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 PNLIPP16233 465 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 DUSP1P28562 367 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 RFC3P40938 356 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 MMP16P51512 607 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 SSR4P51571 173 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 CARD18P57730 90 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 GUSBP11Q6P575 273 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 ZNF813Q6ZN06 617 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 ZNF100Q8IYN0 542 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 RNF133Q8WVZ7 376 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 LIPHQ8WWY8 451 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 ADIPOR1Q96A54 375 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 MRPS24Q96EL2 167 aaKnown RBP6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 RRNAD1Q96FB5 475 aaKnown RBP6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 NPAS1Q99742 590 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 MESP1Q9BRJ9 268 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 MFRPQ9BY79 579 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 ALX4Q9H161 411 aaPredicted RBP6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 MOB1AQ9H8S9 216 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 FN3KRPQ9HA64 309 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 ZFP57Q9NU63 452 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 MPDZO75970 2070 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 IGKV1D-43A0A0B4J1Z2 117 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 LIPT2A6NK58 231 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 TNFSF11O14788 317 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 ST8SIA3O43173 380 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 SYNGR4O95473 234 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 SFTA3P0C7M3 94 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 MST1P26927 711 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 FOLR3P41439 243 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 RBP2P50120 134 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 FOXK1P85037 733 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 PJVKQ0ZLH3 352 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 ANKRD37Q7Z713 158 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 GLRX5Q86SX6 157 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 CMTM1Q8IZ96 169 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 FBXL14Q8N1E6 418 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 SLC25A43Q8WUT9 341 aaPredicted RBP6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 ASB13Q8WXK3 278 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 SPACA9Q96E40 222 aaPredicted RBP6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 REEP6Q96HR9 211 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 HDHD3Q9BSH5 251 aaPredicted RBP6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 SOX7Q9BT81 388 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 NIT2Q9NQR4 276 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 FAM86C1Q9NVL1 165 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 NECAP2Q9NVZ3 263 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 MYOTQ9UBF9 498 aa6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 PURGQ9UJV8 347 aaKnown RBP6.08□□□□□ -1.44
SYNPO2-206ENST00000610556 PRELID3BQ9Y3B1 194 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms