RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 PROK1P58294 105 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 IL5RAQ01344 420 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 SNCBQ16143 134 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 TAF9Q16594 264 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 LRRC10Q5BKY1 277 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 STUMQ69YW2 141 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 METAP1DQ6UB28 335 aaPredicted RBP10.81□□□□□ -0.68
RPS28-204ENST00000602140 Q6ZSV7 163 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 SHFQ7M4L6 423 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 TIGD4Q8IY51 512 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 FTMTQ8N4E7 242 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 Q8N7P7 452 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 ZSCAN4Q8NAM6 433 aaPredicted RBP10.81□□□□□ -0.68
RPS28-204ENST00000602140 OR10G2Q8NGC3 310 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 TEX47Q8TBZ9 253 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 NPRL2Q8WTW4 380 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 LRTOMTQ8WZ04 291 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 H1FXQ92522 213 aaKnown RBP10.81□□□□□ -0.68
RPS28-204ENST00000602140 RPL3LQ92901 407 aaKnown RBP10.81□□□□□ -0.68
RPS28-204ENST00000602140 UBE2FQ969M7 185 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 DMRTB1Q96MA1 342 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 NIPSNAP1Q9BPW8 284 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 RBM4BQ9BQ04 359 aaKnown RBP10.81□□□□□ -0.68
RPS28-204ENST00000602140 DCTN5Q9BTE1 182 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 WDR13Q9H1Z4 485 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 OR51V1Q9H2C8 321 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 HAO2Q9NYQ3 351 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 CAB39Q9Y376 341 aaPredicted RBP10.81□□□□□ -0.68
RPS28-204ENST00000602140 MPC1Q9Y5U8 109 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 BTBD17A6NE02 478 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 ZNF850A8MQ14 1090 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 H3BN98 237 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 TFF1P04155 84 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 EEF1B2P24534 225 aaKnown RBP10.8□□□□□ -0.68
RPS28-204ENST00000602140 ACKR3P25106 362 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 GUCA2AQ02747 115 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 PRDX4Q13162 271 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 KLRD1Q13241 179 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 FAM98BQ52LJ0 330 aaKnown RBP10.8□□□□□ -0.68
RPS28-204ENST00000602140 ATPAF1Q5TC12 328 aaPredicted RBP10.8□□□□□ -0.68
RPS28-204ENST00000602140 DHRS7BQ6IAN0 325 aaPredicted RBP10.8□□□□□ -0.68
RPS28-204ENST00000602140 LCN8Q6JVE9 175 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 CD300LDQ6UXZ3 194 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 KCTD8Q6ZWB6 473 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 PIGWQ7Z7B1 504 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 DHFR2Q86XF0 187 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.8□□□□□ -0.68
RPS28-204ENST00000602140 THEM6Q8WUY1 208 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 OR5P3Q8WZ94 311 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 RTL8AQ9BWD3 113 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 RGCCQ9H4X1 137 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 TCF7L1Q9HCS4 588 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 ZNRD1Q9P1U0 126 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 ZNF391Q9UJN7 358 aa10.8□□□□□ -0.68
RPS28-204ENST00000602140 NOTCH1P46531 2555 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 NKX6-3A6NJ46 265 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 TMEM210A6NLX4 147 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 B2RBV5 119 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 NPFFO15130 113 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 AKR7A2O43488 359 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 ATP8B1O43520 1251 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 SELENOFO60613 162 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 LYNP07948 512 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 PAICSP22234 425 aaKnown RBP10.79□□□□□ -0.68
RPS28-204ENST00000602140 MNAT1P51948 309 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 GYS2P54840 703 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 GNGT1P63211 74 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 MS4A2Q01362 244 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 ZNF788Q6ZQV5 615 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 OR10Z1Q8NGY1 313 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 OTOSQ8NHW6 89 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 C8orf46Q8TAG6 207 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 GIPC3Q8TF64 312 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 PIGCQ92535 297 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 MED30Q96HR3 178 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 RNF170Q96K19 258 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 LYZL4Q96KX0 146 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 RAB3IPQ96QF0 476 aaPredicted RBP10.79□□□□□ -0.68
RPS28-204ENST00000602140 FEVQ99581 238 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 PKP2Q99959 881 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 FGF23Q9GZV9 251 aaPredicted RBP10.79□□□□□ -0.68
RPS28-204ENST00000602140 DNTTIP1Q9H147 329 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 MUC13Q9H3R2 512 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 C16orf95Q9H693 158 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 VPREB3Q9UKI3 123 aa10.79□□□□□ -0.68
RPS28-204ENST00000602140 MEIOCA2RUB1 952 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 PRR23D1E9PI22 279 aaPredicted RBP10.78□□□□□ -0.68
RPS28-204ENST00000602140 TSPAN15O95858 294 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 PAHP00439 452 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 CST4P01036 141 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 PRR23D2P0DMB1 279 aaPredicted RBP10.78□□□□□ -0.68
RPS28-204ENST00000602140 POU1F1P28069 291 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 SAA4P35542 130 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 TGFBR2P37173 567 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 TRIM25Q14258 630 aaKnown RBP10.78□□□□□ -0.68
RPS28-204ENST00000602140 DGUOKQ16854 277 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 FAM76BQ5HYJ3 339 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 PLBD1Q6P4A8 553 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 ZDHHC23Q8IYP9 409 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 ARHGAP24Q8N264 748 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms