RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 FEVQ99581 238 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 RTL8AQ9BWD3 113 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 WDR13Q9H1Z4 485 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 DPAGT1Q9H3H5 408 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 MAGIXQ9H6Y5 334 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 KAAG1Q9UBP8 84 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 KPTNQ9Y664 436 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 WNK1Q9H4A3 2382 aa14.48□□□□□ -0.09
SHKBP1-223ENST00000600552 NKX6-3A6NJ46 265 aa14.47□□□□□ -0.09
SHKBP1-223ENST00000600552 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-223ENST00000600552 M0QZ24 198 aa14.47□□□□□ -0.09
SHKBP1-223ENST00000600552 GNGT2O14610 69 aa14.47□□□□□ -0.09
SHKBP1-223ENST00000600552 AKR7A2O43488 359 aa14.47□□□□□ -0.09
SHKBP1-223ENST00000600552 TIPRLO75663 272 aa14.47□□□□□ -0.09
SHKBP1-223ENST00000600552 NDUFB7P17568 137 aa14.47□□□□□ -0.09
SHKBP1-223ENST00000600552 PAICSP22234 425 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-223ENST00000600552 CFL1P23528 166 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-223ENST00000600552 EEF1B2P24534 225 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-223ENST00000600552 RPS7P62081 194 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-223ENST00000600552 IL5RAQ01344 420 aa14.47□□□□□ -0.09
SHKBP1-223ENST00000600552 GINS1Q14691 196 aa14.47□□□□□ -0.09
SHKBP1-223ENST00000600552 PLBD1Q6P4A8 553 aa14.47□□□□□ -0.09
SHKBP1-223ENST00000600552 LINC01006Q8NI28 216 aa14.47□□□□□ -0.09
SHKBP1-223ENST00000600552 CCDC124Q96CT7 223 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-223ENST00000600552 RNF170Q96K19 258 aa14.47□□□□□ -0.09
SHKBP1-223ENST00000600552 HAO2Q9NYQ3 351 aa14.47□□□□□ -0.09
SHKBP1-223ENST00000600552 A0A1B0GVI7 797 aa14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 A0A1W2PQ09 198 aa14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 BTBD17A6NE02 478 aa14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 PRR23D1E9PI22 279 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 ATP8B1O43520 1251 aa14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 CST1P01037 141 aa14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 LYNP07948 512 aa14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 PRR23D2P0DMB1 279 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 OPRL1P41146 370 aa14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 GABRA2P47869 451 aa14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 TRIM25Q14258 630 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 DMRTC1Q5HYR2 192 aa14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 LCN8Q6JVE9 175 aa14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 PRSS45Q7RTY3 260 aa14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 GALNT4Q8N4A0 578 aa14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 FAM81AQ8TBF8 368 aa14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 CLPTM1LQ96KA5 538 aa14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 HIST1H2AAQ96QV6 131 aa14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 PKP2Q99959 881 aa14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 CITED1Q99966 193 aa14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 TCF7L1Q9HCS4 588 aa14.46□□□□□ -0.09
SHKBP1-223ENST00000600552 TIMM23O14925 209 aa14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 PAHP00439 452 aa14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 FBP1P09467 338 aa14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 AMY2BP19961 511 aa14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 ACKR3P25106 362 aa14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 HCCSP53701 268 aa14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 TAF9Q16594 264 aa14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 DHRS7BQ6IAN0 325 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 GDPGP1Q6ZNW5 385 aa14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 COMMD2Q86X83 199 aa14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 FTMTQ8N4E7 242 aa14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 LY6G5BQ8NDX9 201 aa14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 OR5P3Q8WZ94 311 aa14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 ITPKCQ96DU7 683 aa14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 DCTN5Q9BTE1 182 aa14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 MUC13Q9H3R2 512 aa14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 ELL3Q9HB65 397 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 KLHDC2Q9Y2U9 406 aa14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 CAB39Q9Y376 341 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 MPC1Q9Y5U8 109 aa14.45□□□□□ -0.1
SHKBP1-223ENST00000600552 MEIOCA2RUB1 952 aa14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 RNASEK-C17orf49H0YIS7 233 aa14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 PSMD9O00233 223 aa14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 NPFFO15130 113 aa14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 TGM4P49221 684 aa14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 GPM6AP51674 278 aa14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 SNCBQ16143 134 aa14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 STUMQ69YW2 141 aa14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 Q6ZSV7 163 aa14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 RHOUQ7L0Q8 258 aa14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 KRT77Q7Z794 578 aa14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 TMEM179BQ7Z7N9 219 aa14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 LDLRAD3Q86YD5 345 aa14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 CPOQ8IVL8 374 aa14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 FAM110DQ8TAY7 271 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 LRTOMTQ8WZ04 291 aa14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 LYZL4Q96KX0 146 aa14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 RAB3IPQ96QF0 476 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 RBM4BQ9BQ04 359 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 CHID1Q9BWS9 393 aa14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 RGCCQ9H4X1 137 aa14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 SLC25A10Q9UBX3 287 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-223ENST00000600552 TGP01266 2768 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 ANKRD61A6NGH8 418 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 E2F6O75461 281 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 RAP2AP10114 183 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 GLRA1P23415 457 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 CAPZA1P52907 286 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 GUCA2AQ02747 115 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 DGUOKQ16854 277 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 C11orf91Q3C1V1 193 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 CEP78Q5JTW2 689 aa14.43□□□□□ -0.1
SHKBP1-223ENST00000600552 ASPHD2Q6ICH7 369 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms