RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	GTF3A	Q92664	365 aa	Known RBP	18.71	■□□□□ 0.59
LTBP4-227	ENST00000600026	PERP	Q96FX8	193 aa		18.71	■□□□□ 0.59
LTBP4-227	ENST00000600026	DERL3	Q96Q80	235 aa		18.71	■□□□□ 0.59
LTBP4-227	ENST00000600026	VRK1	Q99986	396 aa	Predicted RBP	18.71	■□□□□ 0.59
LTBP4-227	ENST00000600026	GSX2	Q9BZM3	304 aa		18.71	■□□□□ 0.59
LTBP4-227	ENST00000600026	MRPL15	Q9P015	296 aa	Known RBP	18.71	■□□□□ 0.59
LTBP4-227	ENST00000600026	CKLF	Q9UBR5	152 aa		18.71	■□□□□ 0.59
LTBP4-227	ENST00000600026	CGGBP1	Q9UFW8	167 aa	Predicted RBP	18.71	■□□□□ 0.59
LTBP4-227	ENST00000600026	CHD3	Q12873	2000 aa	Known RBP	18.71	■□□□□ 0.59
LTBP4-227	ENST00000600026	TRBV5-7	A0A0A0MS05	114 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	LOC100506127	A0A0U1RQW1	187 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	PLSCR5	A0PG75	271 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	NOL3	O60936	208 aa	Known RBP	18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	GPX5	O75715	221 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	CST4	P01036	141 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	NAT2	P11245	290 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	FGF9	P31371	208 aa	Predicted RBP	18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	MMP15	P51511	669 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	INSL4	Q14641	139 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	HSD17B12	Q53GQ0	312 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	CLVS2	Q5SYC1	327 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	ZCCHC24	Q8N2G6	241 aa	Known RBP	18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	PARP16	Q8N5Y8	322 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	OR5D14	Q8NGL3	314 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	PIGC	Q92535	297 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	ADAT3	Q96EY9	351 aa	Predicted RBP	18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	TRMT61A	Q96FX7	289 aa	Known RBP	18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	SORCS2	Q96PQ0	1159 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	PAPOLG	Q9BWT3	736 aa	Known RBP	18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	SLC22A4	Q9H015	551 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	TPK1	Q9H3S4	243 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	NOX4	Q9NPH5	578 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	CYSLTR2	Q9NS75	346 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	TXNL4B	Q9NX01	149 aa	Known RBP	18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	NOP16	Q9Y3C1	178 aa	Known RBP	18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	RHBDD3	Q9Y3P4	386 aa		18.7	■□□□□ 0.58
LTBP4-227	ENST00000600026	USF3	Q68DE3	2245 aa		18.69	■□□□□ 0.58
LTBP4-227	ENST00000600026		A0A1W2PPK0	400 aa		18.69	■□□□□ 0.58
LTBP4-227	ENST00000600026		A6NIN4	97 aa		18.69	■□□□□ 0.58
LTBP4-227	ENST00000600026	NDUFS7	O75251	213 aa		18.69	■□□□□ 0.58
LTBP4-227	ENST00000600026	UCHL1	P09936	223 aa		18.69	■□□□□ 0.58
LTBP4-227	ENST00000600026	RIPPLY3	P57055	190 aa		18.69	■□□□□ 0.58
LTBP4-227	ENST00000600026	LRRC75A-AS1	Q8N1F1	130 aa		18.69	■□□□□ 0.58
LTBP4-227	ENST00000600026	SLITRK2	Q9H156	845 aa		18.69	■□□□□ 0.58
LTBP4-227	ENST00000600026	ZCCHC4	Q9H5U6	513 aa		18.69	■□□□□ 0.58
LTBP4-227	ENST00000600026	NEK6	Q9HC98	313 aa		18.69	■□□□□ 0.58
LTBP4-227	ENST00000600026	ABCB9	Q9NP78	766 aa		18.69	■□□□□ 0.58
LTBP4-227	ENST00000600026	TMEM100	Q9NV29	134 aa		18.69	■□□□□ 0.58
LTBP4-227	ENST00000600026	MPC1	Q9Y5U8	109 aa		18.69	■□□□□ 0.58
LTBP4-227	ENST00000600026	ANKRD61	A6NGH8	418 aa		18.68	■□□□□ 0.58
LTBP4-227	ENST00000600026	ZSCAN5B	A6NJL1	495 aa		18.68	■□□□□ 0.58
LTBP4-227	ENST00000600026	NRAS	P01111	189 aa		18.68	■□□□□ 0.58
LTBP4-227	ENST00000600026	ATP5J2	P56134	94 aa		18.68	■□□□□ 0.58
LTBP4-227	ENST00000600026	C22orf42	Q6IC83	251 aa		18.68	■□□□□ 0.58
LTBP4-227	ENST00000600026	UTS2B	Q765I0	119 aa		18.68	■□□□□ 0.58
LTBP4-227	ENST00000600026	KRT74	Q7RTS7	529 aa		18.68	■□□□□ 0.58
LTBP4-227	ENST00000600026	OR13G1	Q8NGZ3	307 aa		18.68	■□□□□ 0.58
LTBP4-227	ENST00000600026	TECTB	Q96PL2	329 aa		18.68	■□□□□ 0.58
LTBP4-227	ENST00000600026	HIST1H2AA	Q96QV6	131 aa		18.68	■□□□□ 0.58
LTBP4-227	ENST00000600026	FOXC2	Q99958	501 aa		18.68	■□□□□ 0.58
LTBP4-227	ENST00000600026	CHST5	Q9GZS9	411 aa		18.68	■□□□□ 0.58
LTBP4-227	ENST00000600026	MS4A5	Q9H3V2	200 aa		18.68	■□□□□ 0.58
LTBP4-227	ENST00000600026	TCF7L1	Q9HCS4	588 aa		18.68	■□□□□ 0.58
LTBP4-227	ENST00000600026	NDUFA13	Q9P0J0	144 aa		18.68	■□□□□ 0.58
LTBP4-227	ENST00000600026	FOXJ3	Q9UPW0	622 aa		18.68	■□□□□ 0.58
LTBP4-227	ENST00000600026	AKAP9	Q99996	3911 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	ANXA2P2	A6NMY6	339 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	ZNF850	A8MQ14	1090 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	C17orf100	A8MU93	164 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	GMDS	O60547	372 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	IGHV4-39	P01824	125 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	OCM	P0CE72	109 aa	Predicted RBP	18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	FST	P19883	344 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	CA6	P23280	308 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	MYL9	P24844	172 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	PPP3R1	P63098	170 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	PRDX4	Q13162	271 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	CNN3	Q15417	329 aa	Known RBP	18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	TMEM42	Q69YG0	159 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	MOB3C	Q70IA8	216 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	ZDHHC23	Q8IYP9	409 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	RPL3L	Q92901	407 aa	Known RBP	18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	KCTD7	Q96MP8	289 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	SLC30A2	Q9BRI3	323 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	RAB1B	Q9H0U4	201 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	MSL2	Q9HCI7	577 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	GPR173	Q9NS66	373 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	TAS2R4	Q9NYW5	299 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	ITGB1BP2	Q9UKP3	347 aa		18.67	■□□□□ 0.58
LTBP4-227	ENST00000600026	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	CCDC160	A6NGH7	325 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	PIN1P1	O15428	100 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	LILRA1	O75019	489 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	GABARAP	O95166	117 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	RAB3A	P20336	220 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	CALR	P27797	417 aa	Known RBP	18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	ZNF81	P51508	661 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	ART1	P52961	327 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	TMBIM6	P55061	237 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	LSM3	P62310	102 aa	Known RBP	18.66	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms