RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 TUBAL3A6NHL2 446 aa12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 ZNF850A8MQ14 1090 aa12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 ABCD4O14678 606 aa12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 ZNF250P15622 560 aa12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 PRKACBP22694 351 aa12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 LOXP28300 417 aaPredicted RBP12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 RPS23P62266 143 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 CNN3Q15417 329 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 RGS7BPQ6MZT1 257 aaPredicted RBP12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 PIGCQ92535 297 aa12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 SPSB1Q96BD6 273 aa12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 WDFY2Q96P53 400 aa12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 UQCC2Q9BRT2 126 aa12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 FGF23Q9GZV9 251 aaPredicted RBP12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 MRPL15Q9P015 296 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 STEAP1Q9UHE8 339 aa12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 GPR160Q9UJ42 338 aa12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 MPC1Q9Y5U8 109 aa12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 IGLV3-9A0A075B6K5 115 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 A0A1B0GWJ7 208 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 SIAH2O43255 324 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 PAHP00439 452 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 INHBBP09529 407 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 CALCBP10092 127 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 SNRPBP14678 240 aaKnown RBP12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 IGFBP2P18065 325 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 SCAND1P57086 179 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 PRDX4Q13162 271 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 RIN1Q13671 783 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 RAB11BQ15907 218 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 MZT2AQ6P582 158 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 MOB3CQ70IA8 216 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 DMRTC2Q8IXT2 367 aaPredicted RBP12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 ZDHHC23Q8IYP9 409 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 FTMTQ8N4E7 242 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 OR6M1Q8NGM8 313 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 HPSE2Q8WWQ2 592 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 MRI1Q9BV20 369 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 PAPOLGQ9BWT3 736 aaKnown RBP12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 ESRP2Q9H6T0 727 aaKnown RBP12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 CNTD2Q9H8S5 307 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 OR5V1Q9UGF6 321 aa12.61□□□□□ -0.39
SHKBP1-211ENST00000595945 IGKV1-27A0A075B6S5 117 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 PQLC2LA1A4F0 135 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 ANKRD30BLA7E2S9 258 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 SHISA9B4DS77 424 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 IGHV3-13P01766 116 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 HCKP08631 526 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 HTR2CP28335 458 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 GCH1P30793 250 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 ZNF93P35789 620 aaPredicted RBP12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 PEX19P40855 299 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 FABP6P51161 128 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 FUT6P51993 359 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 CLDN12P56749 244 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 MOGQ16653 247 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 CEACAM21Q3KPI0 293 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 BEX5Q5H9J7 111 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 DMRTC1Q5HYR2 192 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 PLCXD3Q63HM9 321 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 MFSD4AQ8N468 514 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 JAGN1Q8N5M9 183 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 OR8G5Q8NG78 346 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 OR4D6Q8NGJ1 314 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 OR5H6Q8NGV6 325 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 TRMT10AQ8TBZ6 339 aaKnown RBP12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 LGALS14Q8TCE9 139 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 NPRL2Q8WTW4 380 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 OR5P3Q8WZ94 311 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 ITPKCQ96DU7 683 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 PLPPR2Q96GM1 343 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 RADILQ96JH8 1075 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 CMTM3Q96MX0 182 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 SORCS2Q96PQ0 1159 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 SPACA5Q96QH8 159 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 NKX3-1Q99801 234 aaPredicted RBP12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 ZNF442Q9H7R0 627 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 LIN7BQ9HAP6 207 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 PLGRKTQ9HBL7 147 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 NEK6Q9HC98 313 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 ABCB9Q9NP78 766 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 AKIP1Q9NQ31 210 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 COMMD3Q9UBI1 195 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 SPATA2Q9UM82 520 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 CMAHPQ9Y471 501 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 CACNA1DQ01668 2161 aa12.6□□□□□ -0.39
SHKBP1-211ENST00000595945 DEFB108AA8MXU0 73 aa12.59□□□□□ -0.39
SHKBP1-211ENST00000595945 C19orf84I3L1E1 186 aa12.59□□□□□ -0.39
SHKBP1-211ENST00000595945 LDLRAD4O15165 306 aa12.59□□□□□ -0.39
SHKBP1-211ENST00000595945 MAGEB3O15480 346 aa12.59□□□□□ -0.39
SHKBP1-211ENST00000595945 NAT2P11245 290 aa12.59□□□□□ -0.39
SHKBP1-211ENST00000595945 ETV6P41212 452 aa12.59□□□□□ -0.39
SHKBP1-211ENST00000595945 ALDH3B1P43353 468 aa12.59□□□□□ -0.39
SHKBP1-211ENST00000595945 MMP15P51511 669 aa12.59□□□□□ -0.39
SHKBP1-211ENST00000595945 ZP1P60852 638 aa12.59□□□□□ -0.39
SHKBP1-211ENST00000595945 P2RY14Q15391 338 aa12.59□□□□□ -0.39
SHKBP1-211ENST00000595945 KISS1Q15726 138 aa12.59□□□□□ -0.39
SHKBP1-211ENST00000595945 LHFPL2Q6ZUX7 228 aa12.59□□□□□ -0.39
SHKBP1-211ENST00000595945 CCDC190Q86UF4 302 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms