RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 HIST2H3AQ71DI3 136 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 CPOQ8IVL8 374 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 ZNF511Q8NB15 262 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 C7orf50Q9BRJ6 194 aaKnown RBP16.88■□□□□ 0.29
LSM4-203ENST00000593829 ABCG5Q9H222 651 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 OR51V1Q9H2C8 321 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 DPAGT1Q9H3H5 408 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 HINT3Q9NQE9 182 aaKnown RBP16.88■□□□□ 0.29
LSM4-203ENST00000593829 INPP5EQ9NRR6 644 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 BABAM2Q9NXR7 383 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 A0A1B0GVI7 797 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 PAHP00439 452 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 PAX1P15863 534 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 UCP2P55851 309 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 TOR2AQ5JU69 321 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 LINC01590Q5TEZ4 76 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 C11orf71Q6IPW1 123 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 SLC18B1Q6NT16 456 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 LYPD4Q6UWN0 246 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 NR2C2APQ86WQ0 139 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 KLBQ86Z14 1044 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 LINC00346Q8IVM7 164 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 LRRC75A-AS1Q8N1F1 130 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 ZNF680Q8NEM1 530 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 OR1F12Q8NHA8 337 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 MAP6Q96JE9 813 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 SORCS2Q96PQ0 1159 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 CXXC4Q9H2H0 198 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 ZNF701Q9NV72 531 aaPredicted RBP16.87■□□□□ 0.29
LSM4-203ENST00000593829 SLCO1C1Q9NYB5 712 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 CCDC168Q8NDH2 2452 aa16.87■□□□□ 0.29
LSM4-203ENST00000593829 OR6C6A6NF89 314 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 B9A039 149 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 SYNGR3O43761 229 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 GPRIN2O60269 458 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 GLCEO94923 617 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 MST1LQ2TV78 715 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 ELFN2Q5R3F8 820 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 IDNKQ5T6J7 187 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 UNQ6126/PRO20091Q6UXV3 157 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 CXXC5Q7LFL8 322 aaKnown RBP16.86■□□□□ 0.29
LSM4-203ENST00000593829 ACBD7Q8N6N7 88 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 GSX2Q9BZM3 304 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 BCL2L14Q9BZR8 327 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 HEXA-AS1Q9H8Q6 139 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 WDR76Q9H967 626 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 H2AFY2Q9P0M6 372 aaPredicted RBP16.86■□□□□ 0.29
LSM4-203ENST00000593829 ATPIF1Q9UII2 106 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 GDF2Q9UK05 429 aaPredicted RBP16.86■□□□□ 0.29
LSM4-203ENST00000593829 LANCL1O43813 399 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 CDKN1AP38936 164 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 EFNB3Q15768 340 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 SWI5Q1ZZU3 235 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 ARL9Q6T311 187 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 OR11H7Q8NGC8 314 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 OR51B6Q9H340 312 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 MGAT4AQ9UM21 535 aa16.86■□□□□ 0.29
LSM4-203ENST00000593829 ZNF593O00488 134 aaPredicted RBP16.85■□□□□ 0.29
LSM4-203ENST00000593829 EIF4EP06730 217 aaKnown RBP16.85■□□□□ 0.29
LSM4-203ENST00000593829 WNT5AP41221 380 aa16.85■□□□□ 0.29
LSM4-203ENST00000593829 PTH2RP49190 550 aa16.85■□□□□ 0.29
LSM4-203ENST00000593829 KLHL12Q53G59 568 aa16.85■□□□□ 0.29
LSM4-203ENST00000593829 BCL2L15Q5TBC7 163 aa16.85■□□□□ 0.29
LSM4-203ENST00000593829 CFAP77Q6ZQR2 320 aa16.85■□□□□ 0.29
LSM4-203ENST00000593829 MRPL24Q96A35 216 aaKnown RBP16.85■□□□□ 0.29
LSM4-203ENST00000593829 PERPQ96FX8 193 aa16.85■□□□□ 0.29
LSM4-203ENST00000593829 C4orf45Q96LM5 186 aa16.85■□□□□ 0.29
LSM4-203ENST00000593829 CACNG6Q9BXT2 260 aa16.85■□□□□ 0.29
LSM4-203ENST00000593829 PLK3Q9H4B4 646 aa16.85■□□□□ 0.29
LSM4-203ENST00000593829 OTOGQ6ZRI0 2925 aa16.85■□□□□ 0.29
LSM4-203ENST00000593829 RPS27P42677 84 aaKnown RBP16.84■□□□□ 0.29
LSM4-203ENST00000593829 TAS2R43P59537 309 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 INSL4Q14641 139 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 TESK1Q15569 626 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 PCK2Q16822 640 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 TEX30Q5JUR7 227 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 CLLU1Q5K131 121 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 SLC35D3Q5M8T2 416 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 RGS7BPQ6MZT1 257 aaPredicted RBP16.84■□□□□ 0.29
LSM4-203ENST00000593829 SLC38A6Q8IZM9 456 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 BBS1Q8NFJ9 593 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 OR51J1Q9H342 316 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 ELOVL3Q9HB03 270 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 TRIM36Q9NQ86 728 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 CREBBPQ92793 2442 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 PLPP2O43688 288 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 SPARCP09486 303 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 ECH1Q13011 328 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 SFXN4Q6P4A7 337 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 C1orf174Q8IYL3 243 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 ZNF101Q8IZC7 436 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 PHF21AQ96BD5 680 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 ZMYND19Q96E35 227 aaPredicted RBP16.84■□□□□ 0.29
LSM4-203ENST00000593829 INTS14Q96SY0 518 aa16.84■□□□□ 0.29
LSM4-203ENST00000593829 PPIL3Q9H2H8 161 aaKnown RBP16.84■□□□□ 0.29
LSM4-203ENST00000593829 FBXO9Q9UK97 447 aaPredicted RBP16.84■□□□□ 0.29
LSM4-203ENST00000593829 MYO9AB2RTY4 2548 aa16.83■□□□□ 0.29
LSM4-203ENST00000593829 MEIKINA0A087WXM9 373 aa16.83■□□□□ 0.28
LSM4-203ENST00000593829 A0A0G2JK05 382 aa16.83■□□□□ 0.28
LSM4-203ENST00000593829 ANKRD61A6NGH8 418 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms