RNA–Protein interactions for RNA: ENST00000592960.1

PKN1-215, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-215	ENST00000592960		Q499Y3	187 aa		12.85	□□□□□ -0.35
PKN1-215	ENST00000592960	PRSS45	Q7RTY3	260 aa		12.85	□□□□□ -0.35
PKN1-215	ENST00000592960	NAA40	Q86UY6	237 aa		12.85	□□□□□ -0.35
PKN1-215	ENST00000592960	COMMD2	Q86X83	199 aa		12.85	□□□□□ -0.35
PKN1-215	ENST00000592960	ZNF584	Q8IVC4	421 aa		12.85	□□□□□ -0.35
PKN1-215	ENST00000592960	RDH10	Q8IZV5	341 aa		12.85	□□□□□ -0.35
PKN1-215	ENST00000592960	THRSP	Q92748	146 aa		12.85	□□□□□ -0.35
PKN1-215	ENST00000592960	HPS1	Q92902	700 aa		12.85	□□□□□ -0.35
PKN1-215	ENST00000592960	OR14A2	Q96R54	314 aa		12.85	□□□□□ -0.35
PKN1-215	ENST00000592960	OR10A2	Q9H208	303 aa		12.85	□□□□□ -0.35
PKN1-215	ENST00000592960	MOV10	Q9HCE1	1003 aa	Known RBP	12.85	□□□□□ -0.35
PKN1-215	ENST00000592960	LOC100509620	A0A075B734	347 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960		A0A0A6YYJ9	748 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	TRBV5-5	A0A0J9YX44	114 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960		A0A1W2PPW3	197 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	ZNF879	B4DU55	563 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960		B9A039	149 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960		H3BSH0	61 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	SPRY1	O43609	319 aa	Predicted RBP	12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	SC5D	O75845	299 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	ARL6IP5	O75915	188 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	ISG15	P05161	165 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	PAX7	P23759	505 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	MAPK3	P27361	379 aa	Predicted RBP	12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	SOX2	P48431	317 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	EFNB3	Q15768	340 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	GFOD2	Q3B7J2	385 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	ZMAT1	Q5H9K5	638 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	UNQ9370/PRO34162	Q6UXP9	181 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	SLC30A7	Q8NEW0	376 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	OR52H1	Q8NGJ2	320 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	OR1J2	Q8NGS2	313 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	OR10AC1	Q8NH08	325 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	NDNF	Q8TB73	568 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	ZFAND2B	Q8WV99	257 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	PHYHIP	Q92561	330 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	MS4A3	Q96HJ5	214 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	POM121L2	Q96KW2	1035 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	ZNF75A	Q96N20	296 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	BPESC1	Q9GZL8	116 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	DCSTAMP	Q9H295	470 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	CRNN	Q9UBG3	495 aa	Predicted RBP	12.84	□□□□□ -0.35
PKN1-215	ENST00000592960	DHDH	Q9UQ10	334 aa		12.84	□□□□□ -0.35
PKN1-215	ENST00000592960		A0A0U1RQV5	110 aa		12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	SYT7	O43581	403 aa		12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	CD2	P06729	351 aa		12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	CCL2	P13500	99 aa		12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	ZNF14	P17017	642 aa	Predicted RBP	12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	MYL9	P24844	172 aa		12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	HGFAC	Q04756	655 aa		12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	C12orf54	Q6X4T0	127 aa		12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	OR51A4	Q8NGJ6	313 aa		12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	OR13C3	Q8NGS6	347 aa		12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	OR51E1	Q8TCB6	317 aa		12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	VRK1	Q99986	396 aa	Predicted RBP	12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	KCNS3	Q9BQ31	491 aa		12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	DCUN1D5	Q9BTE7	237 aa		12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	PLK3	Q9H4B4	646 aa		12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	CDH20	Q9HBT6	801 aa		12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	GPR84	Q9NQS5	396 aa		12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	CA10	Q9NS85	328 aa		12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	ZNF319	Q9P2F9	582 aa		12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	FBXO9	Q9UK97	447 aa	Predicted RBP	12.83	□□□□□ -0.36
PKN1-215	ENST00000592960	IGHV1-18	A0A0C4DH31	117 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960		A0A1W2PPK0	400 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	XRCC2	O43543	280 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	LILRA1	O75019	489 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	CDRT1	O95170	752 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	IGKV3-15	P01624	115 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	IGLV1-44	P01699	117 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	CELA3B	P08861	270 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	ZNF12	P17014	697 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	CALR	P27797	417 aa	Known RBP	12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	MAGEB1	P43366	347 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	PPOX	P50336	477 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	ADIPOQ	Q15848	244 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	CARTPT	Q16568	116 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	SNAI3	Q3KNW1	292 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	C3orf36	Q3SXR2	165 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	HSD17B12	Q53GQ0	312 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	DOK3	Q7L591	496 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	FAM169B	Q8N8A8	192 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	LINC01356	Q8N9X3	169 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	APOBEC3D	Q96AK3	386 aa	Predicted RBP	12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	DERL3	Q96Q80	235 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	C1QTNF5	Q9BXJ0	243 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960	NOX4	Q9NPH5	578 aa		12.82	□□□□□ -0.36
PKN1-215	ENST00000592960		A0A1B0GTI1	187 aa		12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	LRP5L	A4QPB2	252 aa		12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	UCHL1	P09936	223 aa		12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	OR4A8	P0C604	315 aa		12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	ZNF182	P17025	639 aa	Predicted RBP	12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	CCL1	P22362	96 aa		12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	ANOS1	P23352	680 aa		12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	SRP14	P37108	136 aa	Known RBP	12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	MTNR1B	P49286	362 aa		12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	COMP	P49747	757 aa	Predicted RBP	12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	FAM27D1	Q5T7N8	215 aa		12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	MYPOP	Q86VE0	399 aa	Predicted RBP	12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms