RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 HBMQ6B0K9 141 aa5.28□□□□□ -1.56
VMP1-208ENST00000588617 PLEKHG7Q6ZR37 379 aa5.28□□□□□ -1.56
VMP1-208ENST00000588617 SSX7Q7RTT5 188 aa5.28□□□□□ -1.56
VMP1-208ENST00000588617 OR1S1Q8NH92 325 aa5.28□□□□□ -1.56
VMP1-208ENST00000588617 ZNF488Q96MN9 340 aa5.28□□□□□ -1.56
VMP1-208ENST00000588617 CHAC1Q9BUX1 264 aa5.28□□□□□ -1.56
VMP1-208ENST00000588617 RBFOX1Q9NWB1 397 aaKnown RBP5.28□□□□□ -1.56
VMP1-208ENST00000588617 TFR2Q9UP52 801 aa5.28□□□□□ -1.56
VMP1-208ENST00000588617 SNX24Q9Y343 169 aa5.28□□□□□ -1.56
VMP1-208ENST00000588617 CACNG2Q9Y698 323 aa5.28□□□□□ -1.56
VMP1-208ENST00000588617 IGHV3-66A0A0C4DH42 116 aa5.27□□□□□ -1.57
VMP1-208ENST00000588617 TMEM213A2RRL7 107 aa5.27□□□□□ -1.57
VMP1-208ENST00000588617 FABP12A6NFH5 140 aa5.27□□□□□ -1.57
VMP1-208ENST00000588617 DNASE2O00115 360 aaPredicted RBP5.27□□□□□ -1.57
VMP1-208ENST00000588617 TNFRSF11BO00300 401 aa5.27□□□□□ -1.57
VMP1-208ENST00000588617 AQP9O43315 295 aa5.27□□□□□ -1.57
VMP1-208ENST00000588617 SLC25A14O95258 325 aaPredicted RBP5.27□□□□□ -1.57
VMP1-208ENST00000588617 SLC25A27O95847 323 aa5.27□□□□□ -1.57
VMP1-208ENST00000588617 CXCR1P25024 350 aa5.27□□□□□ -1.57
VMP1-208ENST00000588617 TUFMP49411 452 aaKnown RBP5.27□□□□□ -1.57
VMP1-208ENST00000588617 LHX2P50458 406 aa5.27□□□□□ -1.57
VMP1-208ENST00000588617 PLTPP55058 493 aa5.27□□□□□ -1.57
VMP1-208ENST00000588617 IRF4Q15306 451 aa5.27□□□□□ -1.57
VMP1-208ENST00000588617 TRAM1Q15629 374 aa5.27□□□□□ -1.57
VMP1-208ENST00000588617 SNRNP35Q16560 246 aaKnown RBP5.27□□□□□ -1.57
VMP1-208ENST00000588617 ZNF429Q86V71 674 aa5.27□□□□□ -1.57
VMP1-208ENST00000588617 LGI3Q8N145 548 aa5.27□□□□□ -1.57
VMP1-208ENST00000588617 RORBQ92753 470 aa5.27□□□□□ -1.57
VMP1-208ENST00000588617 TMEM159Q96B96 161 aa5.27□□□□□ -1.57
VMP1-208ENST00000588617 TOLLIPQ9H0E2 274 aa5.27□□□□□ -1.57
VMP1-208ENST00000588617 NLE1Q9NVX2 485 aaPredicted RBP5.27□□□□□ -1.57
VMP1-208ENST00000588617 SIGLEC7Q9Y286 467 aa5.27□□□□□ -1.57
VMP1-208ENST00000588617 SHOX2O60902 331 aaPredicted RBP5.26□□□□□ -1.57
VMP1-208ENST00000588617 GAS8-AS1O95177 125 aa5.26□□□□□ -1.57
VMP1-208ENST00000588617 SNAP29O95721 258 aa5.26□□□□□ -1.57
VMP1-208ENST00000588617 DTYMKP23919 212 aa5.26□□□□□ -1.57
VMP1-208ENST00000588617 PAX6P26367 422 aa5.26□□□□□ -1.57
VMP1-208ENST00000588617 POLR2IP36954 125 aaKnown RBP5.26□□□□□ -1.57
VMP1-208ENST00000588617 PSG7Q13046 419 aa5.26□□□□□ -1.57
VMP1-208ENST00000588617 TRIP13Q15645 432 aaPredicted RBP5.26□□□□□ -1.57
VMP1-208ENST00000588617 TTC32Q5I0X7 151 aa5.26□□□□□ -1.57
VMP1-208ENST00000588617 TMEM236Q5W0B7 351 aa5.26□□□□□ -1.57
VMP1-208ENST00000588617 MRPL52Q86TS9 123 aaKnown RBP5.26□□□□□ -1.57
VMP1-208ENST00000588617 LINC00612Q8N6U2 182 aa5.26□□□□□ -1.57
VMP1-208ENST00000588617 NECAP1Q8NC96 275 aa5.26□□□□□ -1.57
VMP1-208ENST00000588617 RNASEH2CQ8TDP1 164 aaKnown RBP5.26□□□□□ -1.57
VMP1-208ENST00000588617 CDS1Q92903 461 aa5.26□□□□□ -1.57
VMP1-208ENST00000588617 CCDC127Q96BQ5 260 aa5.26□□□□□ -1.57
VMP1-208ENST00000588617 BMFQ96LC9 184 aa5.26□□□□□ -1.57
VMP1-208ENST00000588617 EMC6Q9BV81 110 aa5.26□□□□□ -1.57
VMP1-208ENST00000588617 DRC3Q9H069 523 aa5.26□□□□□ -1.57
VMP1-208ENST00000588617 SLC38A10Q9HBR0 1119 aa5.26□□□□□ -1.57
VMP1-208ENST00000588617 SLC40A1Q9NP59 571 aa5.26□□□□□ -1.57
VMP1-208ENST00000588617 C1orf109Q9NX04 203 aa5.26□□□□□ -1.57
VMP1-208ENST00000588617 RBAKQ9NYW8 714 aaPredicted RBP5.26□□□□□ -1.57
VMP1-208ENST00000588617 ANXA10Q9UJ72 324 aa5.26□□□□□ -1.57
VMP1-208ENST00000588617 ZNF608Q9ULD9 1512 aaPredicted RBP5.26□□□□□ -1.57
VMP1-208ENST00000588617 ABCB11O95342 1321 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 IGLV3-10A0A075B6K4 115 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 TRAV8-6A0A0B4J262 113 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 NKX2-6A6NCS4 301 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 RP2O75695 350 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 TRBV12-3P01733 135 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 PET100P0DJ07 73 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 ZNF17P17021 662 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 HOXA9P31269 272 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 APLNRP35414 380 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 IFITM3Q01628 133 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 RAB31Q13636 194 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 CDNFQ49AH0 187 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 HHATQ5VTY9 493 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 KDM4DQ6B0I6 523 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 FAM92BQ6ZTR7 304 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 BBS7Q8IWZ6 715 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 ATP6V1C2Q8NEY4 427 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 OR51Q1Q8NH59 317 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 BLOC1S5Q8TDH9 187 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 PTX4Q96A99 478 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 PYGO2Q9BRQ0 406 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 SLC25A39Q9BZJ4 359 aaPredicted RBP5.25□□□□□ -1.57
VMP1-208ENST00000588617 DSN1Q9H410 356 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 NOX3Q9HBY0 568 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 HEBP1Q9NRV9 189 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 ORC6Q9Y5N6 252 aa5.25□□□□□ -1.57
VMP1-208ENST00000588617 BAZ1AQ9NRL2 1556 aaPredicted RBP5.25□□□□□ -1.57
VMP1-208ENST00000588617 IGKV1-27A0A075B6S5 117 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 NDUFC2-KCTD14E9PQ53 114 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 PRAMEF26H0Y7S4 382 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 CDIPTO14735 213 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 SLC22A5O76082 557 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 PCCAP05165 728 aaPredicted RBP5.24□□□□□ -1.57
VMP1-208ENST00000588617 CCR6P51684 374 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 AQP5P55064 265 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 CRADDP78560 199 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 NAB1Q13506 487 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 C6orf99Q4VX62 202 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 RBM48Q5RL73 367 aaKnown RBP5.24□□□□□ -1.57
VMP1-208ENST00000588617 OPN5Q6U736 354 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 PCP2Q8IVA1 136 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 PHYHIPLQ96FC7 376 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms