RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 ZNF154Q13106 437 aa16.07■□□□□ 0.16
CIRBP-217ENST00000588230 KCNJ8Q15842 424 aa16.07■□□□□ 0.16
CIRBP-217ENST00000588230 ZNF684Q5T5D7 378 aa16.07■□□□□ 0.16
CIRBP-217ENST00000588230 SFRP4Q6FHJ7 346 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-217ENST00000588230 DCDC5Q6ZRR9 648 aa16.07■□□□□ 0.16
CIRBP-217ENST00000588230 NLRC3Q7RTR2 1065 aa16.07■□□□□ 0.16
CIRBP-217ENST00000588230 FAM220AQ7Z4H9 259 aa16.07■□□□□ 0.16
CIRBP-217ENST00000588230 ZDHHC23Q8IYP9 409 aa16.07■□□□□ 0.16
CIRBP-217ENST00000588230 RHOXF1Q8NHV9 184 aa16.07■□□□□ 0.16
CIRBP-217ENST00000588230 OR5P3Q8WZ94 311 aa16.07■□□□□ 0.16
CIRBP-217ENST00000588230 NEIL1Q96FI4 390 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-217ENST00000588230 RNF170Q96K19 258 aa16.07■□□□□ 0.16
CIRBP-217ENST00000588230 RNPEPL1Q9HAU8 725 aa16.07■□□□□ 0.16
CIRBP-217ENST00000588230 C8orf4Q9NR00 106 aa16.07■□□□□ 0.16
CIRBP-217ENST00000588230 LRCH1Q9Y2L9 728 aa16.07■□□□□ 0.16
CIRBP-217ENST00000588230 DAPL1A0PJW8 107 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 C3orf80F5H4A9 247 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 J3QLI3 93 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 DHRS3O75911 302 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 GABRB1P18505 474 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 GATA3P23771 443 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 CD80P33681 288 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 CSNK2BP67870 215 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 ZNF85Q03923 595 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 TP53I3Q53FA7 332 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 ZBTB37Q5TC79 503 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 LPCAT4Q643R3 524 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 KCTD8Q6ZWB6 473 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 PHC2Q8IXK0 858 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 C11orf53Q8IXP5 236 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 TEX29Q8N6K0 151 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 OR8B3Q8NGG8 313 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 SPATA3Q8NHX4 192 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 OR8B2Q96RD0 313 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 METTL17Q9H7H0 456 aaPredicted RBP16.06■□□□□ 0.16
CIRBP-217ENST00000588230 TRIM36Q9NQ86 728 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 ENPP5Q9UJA9 477 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 GNG8Q9UK08 70 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 SLC22A13Q9Y226 551 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 PIGLQ9Y2B2 252 aa16.06■□□□□ 0.16
CIRBP-217ENST00000588230 TRAV38-1A0A0B4J264 116 aa16.05■□□□□ 0.16
CIRBP-217ENST00000588230 PPIAL4CA0A0B4J2A2 164 aa16.05■□□□□ 0.16
CIRBP-217ENST00000588230 OOEPA6NGQ2 149 aa16.05■□□□□ 0.16
CIRBP-217ENST00000588230 TMEM210A6NLX4 147 aa16.05■□□□□ 0.16
CIRBP-217ENST00000588230 P2RY10O00398 339 aa16.05■□□□□ 0.16
CIRBP-217ENST00000588230 CDIPTO14735 213 aa16.05■□□□□ 0.16
CIRBP-217ENST00000588230 FAHP16930 419 aa16.05■□□□□ 0.16
CIRBP-217ENST00000588230 GNB2P62879 340 aa16.05■□□□□ 0.16
CIRBP-217ENST00000588230 HOXA4Q00056 320 aaPredicted RBP16.05■□□□□ 0.16
CIRBP-217ENST00000588230 KCTD20Q7Z5Y7 419 aa16.05■□□□□ 0.16
CIRBP-217ENST00000588230 CATSPERDQ86XM0 798 aa16.05■□□□□ 0.16
CIRBP-217ENST00000588230 GCSAMQ8N6F7 178 aa16.05■□□□□ 0.16
CIRBP-217ENST00000588230 ACBD7Q8N6N7 88 aa16.05■□□□□ 0.16
CIRBP-217ENST00000588230 PACRGLQ8N7B6 248 aa16.05■□□□□ 0.16
CIRBP-217ENST00000588230 LRRC29Q8WV35 223 aa16.05■□□□□ 0.16
CIRBP-217ENST00000588230 RORBQ92753 470 aa16.05■□□□□ 0.16
CIRBP-217ENST00000588230 SSBP3Q9BWW4 388 aaPredicted RBP16.05■□□□□ 0.16
CIRBP-217ENST00000588230 C7orf69Q9H7B7 122 aa16.05■□□□□ 0.16
CIRBP-217ENST00000588230 OR5V1Q9UGF6 321 aa16.05■□□□□ 0.16
CIRBP-217ENST00000588230 EXOGQ9Y2C4 368 aaKnown RBP16.05■□□□□ 0.16
CIRBP-217ENST00000588230 ANK2Q01484 3957 aa16.05■□□□□ 0.16
CIRBP-217ENST00000588230 A0A1B0GTI1 187 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 RNF212BA8MTL3 300 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 A8MXK9 166 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 J3QRE1 110 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 LHBP01229 141 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 DBTP11182 482 aaKnown RBP16.04■□□□□ 0.16
CIRBP-217ENST00000588230 PEX2P28328 305 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 PITPNBP48739 271 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 ZNF91Q05481 1191 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 ODF4Q2M2E3 257 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 CEP78Q5JTW2 689 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 LYPD2Q6UXB3 125 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 WDR82Q6UXN9 313 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 MOB3CQ70IA8 216 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 DOK3Q7L591 496 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 KRT74Q7RTS7 529 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 HPSE2Q8WWQ2 592 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 RPL3LQ92901 407 aaKnown RBP16.04■□□□□ 0.16
CIRBP-217ENST00000588230 LGALS12Q96DT0 336 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 MRPL48Q96GC5 212 aaKnown RBP16.04■□□□□ 0.16
CIRBP-217ENST00000588230 ADI1Q9BV57 179 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 TMPRSS13Q9BYE2 586 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 TLNRD1Q9H1K6 362 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 AMBNQ9NP70 447 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 MMP26Q9NRE1 261 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 ACOXLQ9NUZ1 547 aa16.04■□□□□ 0.16
CIRBP-217ENST00000588230 POLR3KQ9Y2Y1 108 aaPredicted RBP16.04■□□□□ 0.16
CIRBP-217ENST00000588230 A0A1B0GVI7 797 aa16.03■□□□□ 0.16
CIRBP-217ENST00000588230 TRAPPC2LH3BP13 241 aa16.03■□□□□ 0.16
CIRBP-217ENST00000588230 DLGAP1O14490 977 aa16.03■□□□□ 0.16
CIRBP-217ENST00000588230 NDUFA2O43678 99 aa16.03■□□□□ 0.16
CIRBP-217ENST00000588230 FADS2O95864 444 aaKnown RBP16.03■□□□□ 0.16
CIRBP-217ENST00000588230 EGR1P18146 543 aa16.03■□□□□ 0.16
CIRBP-217ENST00000588230 PSMB10P40306 273 aa16.03■□□□□ 0.16
CIRBP-217ENST00000588230 GPM6AP51674 278 aa16.03■□□□□ 0.16
CIRBP-217ENST00000588230 GNG3P63215 75 aa16.03■□□□□ 0.16
CIRBP-217ENST00000588230 SRSF2Q01130 221 aaKnown RBP16.03■□□□□ 0.16
CIRBP-217ENST00000588230 CEACAM21Q3KPI0 293 aa16.03■□□□□ 0.16
CIRBP-217ENST00000588230 KRTAP24-1Q3LI83 254 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms