RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 CA6P23280 308 aa9□□□□□ -0.97
RFFL-212ENST00000584655 AIMP2Q13155 320 aaKnown RBP9□□□□□ -0.97
RFFL-212ENST00000584655 CLEC9AQ6UXN8 241 aa9□□□□□ -0.97
RFFL-212ENST00000584655 MRPL21Q7Z2W9 205 aaKnown RBP9□□□□□ -0.97
RFFL-212ENST00000584655 ZCCHC24Q8N2G6 241 aaKnown RBP9□□□□□ -0.97
RFFL-212ENST00000584655 DEFB108BQ8NET1 73 aa9□□□□□ -0.97
RFFL-212ENST00000584655 CSNK2A3Q8NEV1 391 aa9□□□□□ -0.97
RFFL-212ENST00000584655 PRSS33Q8NF86 280 aa9□□□□□ -0.97
RFFL-212ENST00000584655 ASB17Q8WXJ9 295 aa9□□□□□ -0.97
RFFL-212ENST00000584655 ADAMTS14Q8WXS8 1223 aa9□□□□□ -0.97
RFFL-212ENST00000584655 SCNM1Q9BWG6 230 aa9□□□□□ -0.97
RFFL-212ENST00000584655 C20orf85Q9H1P6 137 aa9□□□□□ -0.97
RFFL-212ENST00000584655 ZNF275Q9NSD4 429 aaPredicted RBP9□□□□□ -0.97
RFFL-212ENST00000584655 A3GALT2U3KPV4 340 aa9□□□□□ -0.97
RFFL-212ENST00000584655 METTL21EPA6NDL7 271 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 HMX3A6NHT5 357 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 ZNF736B4DX44 427 aaPredicted RBP8.99□□□□□ -0.97
RFFL-212ENST00000584655 ACOT7O00154 380 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 EIF1BO60739 113 aaKnown RBP8.99□□□□□ -0.97
RFFL-212ENST00000584655 SERPINA5P05154 406 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 GP1BAP07359 652 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 CNR1P21554 472 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 FOXF2Q12947 444 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 KISS1Q15726 138 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 UBE2V2Q15819 145 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 AKIRIN2Q53H80 203 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 VWA1Q6PCB0 445 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 TPRX1Q8N7U7 411 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 CPEB3Q8NE35 698 aaKnown RBP8.99□□□□□ -0.97
RFFL-212ENST00000584655 OR6X1Q8NH79 312 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 SLC25A43Q8WUT9 341 aaPredicted RBP8.99□□□□□ -0.97
RFFL-212ENST00000584655 RNF133Q8WVZ7 376 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 LIPHQ8WWY8 451 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 ACOT12Q8WYK0 555 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 NELFAQ9H3P2 528 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 MSL2Q9HCI7 577 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 RDH8Q9NYR8 311 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 TNRC6AQ8NDV7 1962 aaKnown RBP8.99□□□□□ -0.97
RFFL-212ENST00000584655 LOC100289279A0A1B0GTE1 492 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 CENPBD1B2RD01 187 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 B8ZZF3 427 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 ZNF254O75437 659 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 HOXB5P09067 269 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 VSIG8P0DPA2 414 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 NAGAP17050 411 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 AMY2BP19961 511 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 HAAOP46952 286 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 AKR1D1P51857 326 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 PHLDA2Q53GA4 152 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 RNASE10Q5GAN6 216 aaKnown RBP8.99□□□□□ -0.97
RFFL-212ENST00000584655 ELFN2Q5R3F8 820 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 KCTD20Q7Z5Y7 419 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 SLC22A24Q8N4F4 322 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 PAQR4Q8N4S7 273 aaPredicted RBP8.99□□□□□ -0.97
RFFL-212ENST00000584655 SPTSSAQ969W0 71 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 ABRACLQ9P1F3 81 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 PCDHGA9Q9Y5G4 932 aaKnown RBP8.99□□□□□ -0.97
RFFL-212ENST00000584655 FLNCQ14315 2725 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 ZNF462Q96JM2 2506 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 SFTPBP07988 381 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 ARHGDIBP52566 201 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 PITPNAQ00169 270 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 CDC20Q12834 499 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 ZNF239Q16600 458 aaKnown RBP8.99□□□□□ -0.97
RFFL-212ENST00000584655 SPIN3Q5JUX0 258 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 HAGHLQ6PII5 290 aaPredicted RBP8.99□□□□□ -0.97
RFFL-212ENST00000584655 GGNQ86UU5 652 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 FBXL14Q8N1E6 418 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 PNLDC1Q8NA58 520 aaKnown RBP8.99□□□□□ -0.97
RFFL-212ENST00000584655 AKAP1Q92667 903 aaKnown RBP eCLIP8.99□□□□□ -0.978e-7■■■■□ 21.7
RFFL-212ENST00000584655 SLAMF9Q96A28 289 aa8.99□□□□□ -0.97
RFFL-212ENST00000584655 LOC102723996A0A087X1L8 192 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 RGS11O94810 467 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 NPBWR2P48146 333 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 CEBPDP49716 269 aaPredicted RBP8.98□□□□□ -0.97
RFFL-212ENST00000584655 NHLH1Q02575 133 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 PLP2Q04941 152 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 FOXO1Q12778 655 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 TRAM1Q15629 374 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 PCK2Q16822 640 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 FAM209AQ5JX71 171 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 PLA2G2CQ5R387 149 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 LINC00299Q6ZSB3 139 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 PGAP1Q75T13 922 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 FTMTQ8N4E7 242 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 RAB3CQ96E17 227 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 OPN3Q9H1Y3 402 aaPredicted RBP8.98□□□□□ -0.97
RFFL-212ENST00000584655 CA10Q9NS85 328 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 STARD10Q9Y365 291 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 UTP20O75691 2785 aaKnown RBP8.98□□□□□ -0.97
RFFL-212ENST00000584655 MED19A0JLT2 244 aaPredicted RBP8.98□□□□□ -0.97
RFFL-212ENST00000584655 TXNDC12O95881 172 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 GAAP10253 952 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 PRKACBP22694 351 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 STOMP27105 288 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 UBE2NP61088 152 aaKnown RBP8.98□□□□□ -0.97
RFFL-212ENST00000584655 PRB3Q04118 309 aaPredicted RBP8.98□□□□□ -0.97
RFFL-212ENST00000584655 ENDOGQ14249 297 aaKnown RBP8.98□□□□□ -0.97
RFFL-212ENST00000584655 GGTLC2Q14390 218 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 PRR30Q53SZ7 412 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms