RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 RNF148Q8N7C7 305 aa13.14□□□□□ -0.31
SREBF1-221ENST00000583080 ANGPTL6Q8NI99 470 aa13.14□□□□□ -0.31
SREBF1-221ENST00000583080 DUS3LQ96G46 650 aaKnown RBP13.14□□□□□ -0.31
SREBF1-221ENST00000583080 CLPTM1LQ96KA5 538 aa13.14□□□□□ -0.31
SREBF1-221ENST00000583080 RANBP3Q9H6Z4 567 aaPredicted RBP13.14□□□□□ -0.31
SREBF1-221ENST00000583080 NECAP2Q9NVZ3 263 aa13.14□□□□□ -0.31
SREBF1-221ENST00000583080 DNAJC27Q9NZQ0 273 aa13.14□□□□□ -0.31
SREBF1-221ENST00000583080 ZNF319Q9P2F9 582 aa13.14□□□□□ -0.31
SREBF1-221ENST00000583080 ZNF593O00488 134 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-221ENST00000583080 AKR7A2O43488 359 aa13.13□□□□□ -0.31
SREBF1-221ENST00000583080 CLUP10909 449 aa13.13□□□□□ -0.31
SREBF1-221ENST00000583080 RRM2P31350 389 aa13.13□□□□□ -0.31
SREBF1-221ENST00000583080 GNALP38405 381 aa13.13□□□□□ -0.31
SREBF1-221ENST00000583080 SMIM11AP58511 58 aa13.13□□□□□ -0.31
SREBF1-221ENST00000583080 PSME3P61289 254 aa13.13□□□□□ -0.31
SREBF1-221ENST00000583080 CRMP1Q14194 572 aa13.13□□□□□ -0.31
SREBF1-221ENST00000583080 HABP2Q14520 560 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-221ENST00000583080 FAM57BQ71RH2 274 aa13.13□□□□□ -0.31
SREBF1-221ENST00000583080 OR52L1Q8NGH7 329 aa13.13□□□□□ -0.31
SREBF1-221ENST00000583080 GNPDA2Q8TDQ7 276 aa13.13□□□□□ -0.31
SREBF1-221ENST00000583080 PHF21AQ96BD5 680 aa13.13□□□□□ -0.31
SREBF1-221ENST00000583080 DNTTIP1Q9H147 329 aa13.13□□□□□ -0.31
SREBF1-221ENST00000583080 MMP28Q9H239 520 aa13.13□□□□□ -0.31
SREBF1-221ENST00000583080 EFCAB1Q9HAE3 211 aa13.13□□□□□ -0.31
SREBF1-221ENST00000583080 RYR3Q15413 4870 aa13.13□□□□□ -0.31
SREBF1-221ENST00000583080 SIGLEC5O15389 551 aa13.12□□□□□ -0.31
SREBF1-221ENST00000583080 CD28P10747 220 aa13.12□□□□□ -0.31
SREBF1-221ENST00000583080 FMO3P31513 532 aa13.12□□□□□ -0.31
SREBF1-221ENST00000583080 BMXP51813 675 aa13.12□□□□□ -0.31
SREBF1-221ENST00000583080 CAV3P56539 151 aa13.12□□□□□ -0.31
SREBF1-221ENST00000583080 ZNF121P58317 390 aaPredicted RBP13.12□□□□□ -0.31
SREBF1-221ENST00000583080 GRB2P62993 217 aaKnown RBP13.12□□□□□ -0.31
SREBF1-221ENST00000583080 HDXQ7Z353 690 aa13.12□□□□□ -0.31
SREBF1-221ENST00000583080 OR9Q2Q8NGE9 314 aa13.12□□□□□ -0.31
SREBF1-221ENST00000583080 OR6K6Q8NGW6 343 aa13.12□□□□□ -0.31
SREBF1-221ENST00000583080 OR10Z1Q8NGY1 313 aa13.12□□□□□ -0.31
SREBF1-221ENST00000583080 HPSE2Q8WWQ2 592 aa13.12□□□□□ -0.31
SREBF1-221ENST00000583080 SGCDQ92629 289 aa13.12□□□□□ -0.31
SREBF1-221ENST00000583080 AMELYQ99218 206 aa13.12□□□□□ -0.31
SREBF1-221ENST00000583080 MICU1Q9BPX6 476 aa13.12□□□□□ -0.31
SREBF1-221ENST00000583080 BTBD10Q9BSF8 475 aa13.12□□□□□ -0.31
SREBF1-221ENST00000583080 RTL8AQ9BWD3 113 aa13.12□□□□□ -0.31
SREBF1-221ENST00000583080 ZNF702PQ9H963 129 aa13.12□□□□□ -0.31
SREBF1-221ENST00000583080 BRD7Q9NPI1 651 aa13.12□□□□□ -0.31
SREBF1-221ENST00000583080 CD300AQ9UGN4 299 aa13.12□□□□□ -0.31
SREBF1-221ENST00000583080 SF3B6Q9Y3B4 125 aaKnown RBP13.12□□□□□ -0.31
SREBF1-221ENST00000583080 ANXA2P2A6NMY6 339 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 ZNF850A8MQ14 1090 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 ADARB2-AS1A8MUL3 147 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 H0YAE9 185 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 NDUFAB1O14561 156 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 XPNPEP2O43895 674 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 FBXO24O75426 580 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 SASH3O75995 380 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 ACAA1P09110 424 aaPredicted RBP13.11□□□□□ -0.31
SREBF1-221ENST00000583080 SPI1P17947 270 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 ACKR3P25106 362 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 POU1F1P28069 291 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 HSD11B1P28845 292 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 IFNGR2P38484 337 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 IL5RAQ01344 420 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 PRDX4Q13162 271 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 BLMHQ13867 455 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 EIF2B1Q14232 305 aaKnown RBP13.11□□□□□ -0.31
SREBF1-221ENST00000583080 TEX30Q5JUR7 227 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 ZBTB37Q5TC79 503 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 FAM185AQ8N0U4 392 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 ZNRF1Q8ND25 227 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 CSNK2A3Q8NEV1 391 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 PIFOQ8TCI5 191 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 MED30Q96HR3 178 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 PYURFQ96I23 114 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 NKX3-1Q99801 234 aaPredicted RBP13.11□□□□□ -0.31
SREBF1-221ENST00000583080 NMNAT2Q9BZQ4 307 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 NPFFR1Q9GZQ6 430 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 FAM234AQ9H0X4 552 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 MEGF9Q9H1U4 602 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 VIPAS39Q9H9C1 493 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 C19orf12Q9NSK7 152 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 SERTAD4Q9NUC0 356 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 NLKQ9UBE8 527 aa13.11□□□□□ -0.31
SREBF1-221ENST00000583080 IGKV1D-17A0A075B6S4 117 aa13.1□□□□□ -0.31
SREBF1-221ENST00000583080 OR2AT4A6NND4 320 aa13.1□□□□□ -0.31
SREBF1-221ENST00000583080 RHBDL1O75783 438 aa13.1□□□□□ -0.31
SREBF1-221ENST00000583080 FABP3P05413 133 aa13.1□□□□□ -0.31
SREBF1-221ENST00000583080 SLC15A1P46059 708 aa13.1□□□□□ -0.31
SREBF1-221ENST00000583080 GABRA2P47869 451 aa13.1□□□□□ -0.31
SREBF1-221ENST00000583080 LINC01590Q5TEZ4 76 aa13.1□□□□□ -0.31
SREBF1-221ENST00000583080 KCTD8Q6ZWB6 473 aa13.1□□□□□ -0.31
SREBF1-221ENST00000583080 MKXQ8IYA7 352 aa13.1□□□□□ -0.31
SREBF1-221ENST00000583080 TMEM185AQ8NFB2 350 aa13.1□□□□□ -0.31
SREBF1-221ENST00000583080 OR5D13Q8NGL4 314 aa13.1□□□□□ -0.31
SREBF1-221ENST00000583080 OR4Q3Q8NH05 313 aa13.1□□□□□ -0.31
SREBF1-221ENST00000583080 RNF133Q8WVZ7 376 aa13.1□□□□□ -0.31
SREBF1-221ENST00000583080 OR5P3Q8WZ94 311 aa13.1□□□□□ -0.31
SREBF1-221ENST00000583080 R3HDM4Q96D70 268 aa13.1□□□□□ -0.31
SREBF1-221ENST00000583080 ABHD6Q9BV23 337 aa13.1□□□□□ -0.31
SREBF1-221ENST00000583080 OR10A2Q9H208 303 aa13.1□□□□□ -0.31
SREBF1-221ENST00000583080 RAB18Q9NP72 206 aa13.1□□□□□ -0.31
SREBF1-221ENST00000583080 SPAG4Q9NPE6 437 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms