RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 SEMA6AQ9H2E6 1030 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 SIRT7Q9NRC8 400 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 ACTR3BQ9P1U1 418 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 MPC1Q9Y5U8 109 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 ANXA2P2A6NMY6 339 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 RIIAD1A6NNX1 92 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 TSPAN15O95858 294 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 CST4P01036 141 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 GSTT1P30711 240 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 UBE2E1P51965 193 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 ACSM1Q08AH1 577 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 IKZF1Q13422 519 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 DHRS7BQ6IAN0 325 aaPredicted RBP8.68□□□□□ -1.02
RFFL-209ENST00000581265 SLC35E4Q6ICL7 350 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 CD300LDQ6UXZ3 194 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 ZNF788Q6ZQV5 615 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 SHFQ7M4L6 423 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 DEFB107AQ8IZN7 70 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 ANGPTL6Q8NI99 470 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 OR5P3Q8WZ94 311 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 MED30Q96HR3 178 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 INTS14Q96SY0 518 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 AMELYQ99218 206 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 WDR13Q9H1Z4 485 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 ABCB9Q9NP78 766 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 CMC2Q9NRP2 79 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 NDE1Q9NXR1 346 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 FBLN5Q9UBX5 448 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 TAGLN3Q9UI15 199 aa8.68□□□□□ -1.02
RFFL-209ENST00000581265 TMEM210A6NLX4 147 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 M0R1W7 72 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 GLCEO94923 617 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 SOX14O95416 240 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 ACAA1P09110 424 aaPredicted RBP8.67□□□□□ -1.02
RFFL-209ENST00000581265 ZNF3P17036 446 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 ACKR3P25106 362 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 DCTDP32321 178 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 SAA4P35542 130 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 CAV3P56539 151 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 MXRA7P84157 204 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 PRB3Q04118 309 aaPredicted RBP8.67□□□□□ -1.02
RFFL-209ENST00000581265 PPP1R8Q12972 351 aaKnown RBP8.67□□□□□ -1.02
RFFL-209ENST00000581265 DGUOKQ16854 277 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 C2orf68Q2NKX9 166 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 NCR3LG1Q68D85 454 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 C16orf89Q6UX73 402 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 CYP2R1Q6VVX0 501 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 KRT74Q7RTS7 529 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 ERI1Q8IV48 349 aaKnown RBP8.67□□□□□ -1.02
RFFL-209ENST00000581265 TIGD4Q8IY51 512 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 BEND2Q8NDZ0 799 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 OR6N2Q8NGY6 317 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 FAM110DQ8TAY7 271 aaPredicted RBP8.67□□□□□ -1.02
RFFL-209ENST00000581265 RPL3LQ92901 407 aaKnown RBP8.67□□□□□ -1.02
RFFL-209ENST00000581265 PGAM5Q96HS1 289 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 RTL8AQ9BWD3 113 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 MAGIXQ9H6Y5 334 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 METTL8Q9H825 291 aaKnown RBP8.67□□□□□ -1.02
RFFL-209ENST00000581265 BRD7Q9NPI1 651 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 SNTG1Q9NSN8 517 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 ARL8BQ9NVJ2 186 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 ARMC1Q9NVT9 282 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 DNAJC27Q9NZQ0 273 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 DNAJB11Q9UBS4 358 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 SLC25A10Q9UBX3 287 aaPredicted RBP8.67□□□□□ -1.02
RFFL-209ENST00000581265 ZNF391Q9UJN7 358 aa8.67□□□□□ -1.02
RFFL-209ENST00000581265 NOTCH3Q9UM47 2321 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 TCRBV5S2A0A599 114 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 MEIOCA2RUB1 952 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 FAM183AA6NL82 134 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 ZNF850A8MQ14 1090 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 SIGLEC5O15389 551 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 AKR7A2O43488 359 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 PAHP00439 452 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 H2BFMP0C1H6 154 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 SELLP14151 372 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 ATP6V1B2P21281 511 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 DLX1P56177 255 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 EGR3Q06889 387 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 PRDX4Q13162 271 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 KLRD1Q13241 179 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 GFOD2Q3B7J2 385 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 VAX1Q5SQQ9 334 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 OR2T5Q6IEZ7 315 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 CPLX4Q7Z7G2 160 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.66□□□□□ -1.02
RFFL-209ENST00000581265 PNKDQ8N490 385 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 ZNF454Q8N9F8 522 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 OR2T29Q8NH02 315 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 OTOSQ8NHW6 89 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 H1FXQ92522 213 aaKnown RBP8.66□□□□□ -1.02
RFFL-209ENST00000581265 ITFG2Q969R8 447 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 DUS3LQ96G46 650 aaKnown RBP8.66□□□□□ -1.02
RFFL-209ENST00000581265 RNF170Q96K19 258 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 GAFA1Q96PS6 74 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 FAM107BQ9H098 131 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 REEP1Q9H902 201 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 MED20Q9H944 212 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 VNN3Q9NY84 501 aa8.66□□□□□ -1.02
RFFL-209ENST00000581265 SF3B6Q9Y3B4 125 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms