RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 FZR1Q9UM11 496 aa9.19□□□□□ -0.94
SS18-213ENST00000579640 SLC7A11Q9UPY5 501 aa9.19□□□□□ -0.94
SS18-213ENST00000579640 A0A1B0GWJ7 208 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 A0A1W2PPW3 197 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 PLSCR5A0PG75 271 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 ZNF850A8MQ14 1090 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 TMEM127O75204 238 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 CLDN1O95832 211 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 PLAUP00749 431 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 MAS1P04201 325 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 PRF1P14222 555 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 SERPINF1P36955 418 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 RPS19P39019 145 aaKnown RBP9.18□□□□□ -0.94
SS18-213ENST00000579640 FUT6P51993 359 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 MZT1Q08AG7 82 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 EFNB3Q15768 340 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 UBE2V2Q15819 145 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 PLCXD3Q63HM9 321 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 GLT8D1Q68CQ7 371 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 MOB3CQ70IA8 216 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 SPERTQ8NA61 448 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 DNAAF1Q8NEP3 725 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 OR51A2Q8NGJ7 313 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 OR13G1Q8NGZ3 307 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 SYT3Q9BQG1 590 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 FBXO9Q9UK97 447 aaPredicted RBP9.18□□□□□ -0.94
SS18-213ENST00000579640 FLNCQ14315 2725 aa9.18□□□□□ -0.94
SS18-213ENST00000579640 IGKV1-9A0A0C4DH69 117 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.17□□□□□ -0.94
SS18-213ENST00000579640 NOTOA8MTQ0 251 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 B9A039 149 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 HCKP08631 526 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 COX6B1P14854 86 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 ADRA2CP18825 462 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 CA6P23280 308 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 AZGP1P25311 298 aaKnown RBP9.17□□□□□ -0.94
SS18-213ENST00000579640 SOX6P35712 828 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 RORCP51449 518 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 MXD1Q05195 221 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 CEACAM21Q3KPI0 293 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 ALKBH6Q3KRA9 238 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 TMEM255AQ5JRV8 349 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 CEP78Q5JTW2 689 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 DDI2Q5TDH0 399 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 SP5Q6BEB4 398 aaPredicted RBP9.17□□□□□ -0.94
SS18-213ENST00000579640 LHFPL2Q6ZUX7 228 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 LRP11Q86VZ4 500 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 OR5A2Q8NGI9 324 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 LILRB1Q8NHL6 650 aaPredicted RBP9.17□□□□□ -0.94
SS18-213ENST00000579640 DYNC2LI1Q8TCX1 351 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 FBXW5Q969U6 566 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 SLC25A46Q96AG3 418 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 BORCS8Q96FH0 119 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 MICU1Q9BPX6 476 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 FAIMQ9NVQ4 179 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 CCDC59Q9P031 241 aaKnown RBP9.17□□□□□ -0.94
SS18-213ENST00000579640 TAAR3PQ9P1P4 343 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 AK6Q9Y3D8 172 aaKnown RBP9.17□□□□□ -0.94
SS18-213ENST00000579640 V9GY05 133 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 FAM221AA4D161 298 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 OR5B21A6NL26 309 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 LILRA1O75019 489 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 CLEC2LP0C7M8 214 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 CD37P11049 281 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 CFPP27918 469 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 MMP15P51511 669 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 ATP1B3P54709 279 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 OR8G1Q15617 311 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 NKPD1Q17RQ9 610 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 FBXL14Q8N1E6 418 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 OR8S1Q8NH09 359 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 OR5P3Q8WZ94 311 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 NEUROG1Q92886 237 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 ITPKCQ96DU7 683 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 UQCC2Q9BRT2 126 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 ADAT1Q9BUB4 502 aaKnown RBP9.17□□□□□ -0.94
SS18-213ENST00000579640 RTL8AQ9BWD3 113 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 TPK1Q9H3S4 243 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 METTL17Q9H7H0 456 aaPredicted RBP9.17□□□□□ -0.94
SS18-213ENST00000579640 NKIRAS2Q9NYR9 191 aa9.17□□□□□ -0.94
SS18-213ENST00000579640 MYEF2Q9P2K5 600 aaKnown RBP9.17□□□□□ -0.94
SS18-213ENST00000579640 PLCE1Q9P212 2302 aa9.16□□□□□ -0.94
SS18-213ENST00000579640 GCN1Q92616 2671 aaKnown RBP9.16□□□□□ -0.94
SS18-213ENST00000579640 A0A0G2JK05 382 aa9.16□□□□□ -0.94
SS18-213ENST00000579640 A1L4Q6 167 aa9.16□□□□□ -0.94
SS18-213ENST00000579640 HS3ST1O14792 307 aa9.16□□□□□ -0.94
SS18-213ENST00000579640 ZNF93P35789 620 aaPredicted RBP9.16□□□□□ -0.94
SS18-213ENST00000579640 RBP2P50120 134 aa9.16□□□□□ -0.94
SS18-213ENST00000579640 HNRNPA0Q13151 305 aaKnown RBP9.16□□□□□ -0.94
SS18-213ENST00000579640 DGUOKQ16854 277 aa9.16□□□□□ -0.94
SS18-213ENST00000579640 CNPY1Q3B7I2 92 aa9.16□□□□□ -0.94
SS18-213ENST00000579640 SFXN4Q6P4A7 337 aa9.16□□□□□ -0.94
SS18-213ENST00000579640 JAGN1Q8N5M9 183 aa9.16□□□□□ -0.94
SS18-213ENST00000579640 PNLDC1Q8NA58 520 aaKnown RBP9.16□□□□□ -0.94
SS18-213ENST00000579640 OR52N4Q8NGI2 321 aa9.16□□□□□ -0.94
SS18-213ENST00000579640 HPSE2Q8WWQ2 592 aa9.16□□□□□ -0.94
SS18-213ENST00000579640 AP3S1Q92572 193 aa9.16□□□□□ -0.94
SS18-213ENST00000579640 DIRC2Q96SL1 478 aa9.16□□□□□ -0.94
SS18-213ENST00000579640 GFI1Q99684 422 aa9.16□□□□□ -0.94
SS18-213ENST00000579640 C14orf119Q9NWQ9 140 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms